RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 WT1P19544 449 aaPredicted RBP13.56□□□□□ -0.24
PCNX4-209ENST00000555569 CDC25BP30305 580 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 HALP42357 657 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 CTSCP53634 463 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 GFERP55789 205 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 DMPKQ09013 629 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 KIF5AQ12840 1032 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 CLCA4Q14CN2 919 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 TMEM220Q6QAJ8 160 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 CEACAM20Q6UY09 585 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 RBM12BQ8IXT5 1001 aaKnown RBP13.56□□□□□ -0.24
PCNX4-209ENST00000555569 TTC13Q8NBP0 860 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 OR4K2Q8NGD2 314 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 RTP4Q96DX8 246 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 TEFMQ96QE5 360 aaKnown RBP13.56□□□□□ -0.24
PCNX4-209ENST00000555569 SEMA4CQ9C0C4 833 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 SLC40A1Q9NP59 571 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 IMPACTQ9P2X3 320 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 FKBPLQ9UIM3 349 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 WDR37Q9Y2I8 494 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 DNMT3AQ9Y6K1 912 aaPredicted RBP13.56□□□□□ -0.24
PCNX4-209ENST00000555569 ZNF462Q96JM2 2506 aa13.56□□□□□ -0.24
PCNX4-209ENST00000555569 HELZ2Q9BYK8 2649 aaKnown RBP13.56□□□□□ -0.24
PCNX4-209ENST00000555569 GCN1Q92616 2671 aaKnown RBP13.56□□□□□ -0.24
PCNX4-209ENST00000555569 GOLGA6L9A6NEM1 432 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 OR2AG2A6NM03 316 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 DDX3YO15523 660 aaKnown RBP13.55□□□□□ -0.24
PCNX4-209ENST00000555569 RAD1O60671 282 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 SRP72O76094 671 aaKnown RBP13.55□□□□□ -0.24
PCNX4-209ENST00000555569 CRTAMO95727 393 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 FTCDO95954 541 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 C9P02748 559 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 ANKRD34CP0C6C1 535 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 MSH3P20585 1137 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 PBLDP30039 288 aaPredicted RBP13.55□□□□□ -0.24
PCNX4-209ENST00000555569 AKT1P31749 480 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 PDE1BQ01064 536 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 GPR18Q14330 331 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 LONRF2Q1L5Z9 754 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 CACNA2D3Q8IZS8 1091 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 IL22RA1Q8N6P7 574 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 SPC24Q8NBT2 197 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 LRRC45Q96CN5 670 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 ZNF514Q96K75 400 aaPredicted RBP13.55□□□□□ -0.24
PCNX4-209ENST00000555569 C9orf72Q96LT7 481 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 TGM7Q96PF1 710 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 CTRCQ99895 268 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 TBL1YQ9BQ87 522 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 ZPBPQ9BS86 351 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 DESI2Q9BSY9 194 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 ASB8Q9H765 288 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 FBXO8Q9NRD0 319 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 PACSIN2Q9UNF0 486 aaPredicted RBP13.55□□□□□ -0.24
PCNX4-209ENST00000555569 KCTD3Q9Y597 815 aa13.55□□□□□ -0.24
PCNX4-209ENST00000555569 PIKFYVEQ9Y2I7 2098 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 A0A0U1RQJ8 604 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 CAPN5O15484 640 aaPredicted RBP13.54□□□□□ -0.24
PCNX4-209ENST00000555569 ZNF140P52738 457 aaPredicted RBP13.54□□□□□ -0.24
PCNX4-209ENST00000555569 XIAPP98170 497 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 MSLNQ13421 630 aaPredicted RBP13.54□□□□□ -0.24
PCNX4-209ENST00000555569 NFE2L1Q14494 772 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 SPARCL1Q14515 664 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 RPE65Q16518 533 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 FNBP1LQ5T0N5 605 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 DENND5AQ6IQ26 1287 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 FAM83HQ6ZRV2 1179 aaPredicted RBP13.54□□□□□ -0.24
PCNX4-209ENST00000555569 ARHGEF18Q6ZSZ5 1173 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 DET1Q7L5Y6 550 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 KLHDC8BQ8IXV7 354 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 RSC1A1Q92681 617 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 MED8Q96G25 268 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 SPRY4Q9C004 299 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 ARNT2Q9HBZ2 717 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 APMAPQ9HDC9 416 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 FEZ2Q9UHY8 353 aaPredicted RBP13.54□□□□□ -0.24
PCNX4-209ENST00000555569 PILRAQ9UKJ1 303 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 PSMD13Q9UNM6 376 aa13.54□□□□□ -0.24
PCNX4-209ENST00000555569 KLHL33A6NCF5 533 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 POLR1CO15160 346 aaPredicted RBP13.53□□□□□ -0.24
PCNX4-209ENST00000555569 TOX3O15405 576 aaPredicted RBP13.53□□□□□ -0.24
PCNX4-209ENST00000555569 ITGB2P05107 769 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 HADHAP40939 763 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 CAPZBP47756 277 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 LEPRP48357 1165 aaKnown RBP13.53□□□□□ -0.24
PCNX4-209ENST00000555569 KLF1Q13351 362 aaPredicted RBP13.53□□□□□ -0.24
PCNX4-209ENST00000555569 PARP6Q2NL67 630 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 LINC00303Q3SY05 128 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 XKR5Q6UX68 686 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 ZNF605Q86T29 641 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 BEND7Q8N7W2 519 aaPredicted RBP13.53□□□□□ -0.24
PCNX4-209ENST00000555569 FAM71DQ8N9W8 422 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 OR13C4Q8NGS5 318 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 GPR150Q8NGU9 434 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 EXTL1Q92935 676 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 C19orf43Q9BQ61 176 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 SIDT1Q9NXL6 827 aaKnown RBP13.53□□□□□ -0.24
PCNX4-209ENST00000555569 EPHA6Q9UF33 1036 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 CRLS1Q9UJA2 301 aa13.53□□□□□ -0.24
PCNX4-209ENST00000555569 SPTA1P02549 2419 aa13.52□□□□□ -0.24
PCNX4-209ENST00000555569 MGAT4DA6NG13 374 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms