RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 HRH2P25021 359 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 HOXC8P31273 242 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 MAP2K2P36507 400 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 GNB1P62873 340 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 UBE2V1Q13404 147 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 MEP1AQ16819 746 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 SOWAHCQ53LP3 525 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-216ENST00000555550 HSP90AB4PQ58FF6 505 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 GKAP1Q5VSY0 366 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-216ENST00000555550 ZDHHC20Q5W0Z9 365 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 NCEH1Q6PIU2 408 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 SUSD1Q6UWL2 747 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 SH2D5Q6ZV89 423 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 FASTKD5Q7L8L6 764 aaKnown RBP3.5□□□□□ -1.85
SCFD1-216ENST00000555550 PTOV1Q86YD1 416 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 APLFQ8IW19 511 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-216ENST00000555550 TEX11Q8IYF3 940 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 HACE1Q8IYU2 909 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 UCMAQ8WVF2 138 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 POMGNT1Q8WZA1 660 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 SEMA4DQ92854 862 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 MOAP1Q96BY2 351 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 ZNF599Q96NL3 588 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 SLX1AQ9BQ83 275 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 MYH16Q9H6N6 1097 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 SH2D4AQ9H788 454 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 PGAP2Q9UHJ9 254 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 ACAD8Q9UKU7 415 aa3.5□□□□□ -1.85
SCFD1-216ENST00000555550 FLT1P17948 1338 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 A6NL46 340 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 J3QR06 171 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 PSMD14O00487 310 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 SCAMP1O15126 338 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 TMCC2O75069 709 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 ZNF217O75362 1048 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 RNASEH2AO75792 299 aaKnown RBP3.49□□□□□ -1.85
SCFD1-216ENST00000555550 WISP2O76076 250 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 TSHBP01222 138 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 IGLV1-44P01699 117 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 CD48P09326 243 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 PSMA4P25789 261 aaKnown RBP3.49□□□□□ -1.85
SCFD1-216ENST00000555550 PPARGP37231 505 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-216ENST00000555550 MMP15P51511 669 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 KCNJ10P78508 379 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 EIF4A2Q14240 407 aaKnown RBP3.49□□□□□ -1.85
SCFD1-216ENST00000555550 MVPQ14764 893 aaKnown RBP3.49□□□□□ -1.85
SCFD1-216ENST00000555550 LPAL2Q16609 132 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 JAKMIP3Q5VZ66 844 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 FAM53AQ6NSI3 398 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-216ENST00000555550 TMTC3Q6ZXV5 915 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 TDRD7Q8NHU6 1098 aaKnown RBP3.49□□□□□ -1.85
SCFD1-216ENST00000555550 WDR20Q8TBZ3 569 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 ELMOD3Q96FG2 381 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 PPM1MQ96MI6 270 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 C7orf26Q96N11 449 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 GAD1Q99259 594 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 RHNO1Q9BSD3 238 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 RCC2Q9P258 522 aaKnown RBP3.49□□□□□ -1.85
SCFD1-216ENST00000555550 KCNJ14Q9UNX9 436 aa3.49□□□□□ -1.85
SCFD1-216ENST00000555550 TMEM184BQ9Y519 407 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-216ENST00000555550 IGKV6D-41A0A0C4DH26 115 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 PLK4O00444 970 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 HS6ST1O60243 411 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 TMEM63AO94886 807 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 IGHV4-38-2P0DP08 117 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 ACTN1P12814 892 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 GNB3P16520 340 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 CKMT2P17540 419 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 CDH2P19022 906 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-216ENST00000555550 ARL3P36405 182 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 GPR143P51810 404 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 RAB6CQ53S08 254 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 TPRG1Q6ZUI0 275 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 HJURPQ8NCD3 748 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-216ENST00000555550 TMEM190Q8WZ59 177 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 SMPDL3BQ92485 455 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 SENP5Q96HI0 755 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-216ENST00000555550 ART5Q96L15 291 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 EGFL8Q99944 293 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 RAB6CQ9H0N0 254 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 DENND2DQ9H6A0 471 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-216ENST00000555550 KAT14Q9H8E8 782 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 SETD4Q9NVD3 440 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 MIOSQ9NXC5 875 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 ORC3Q9UBD5 711 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-216ENST00000555550 CORO1CQ9ULV4 474 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-216ENST00000555550 MRPS28Q9Y2Q9 187 aaKnown RBP3.48□□□□□ -1.85
SCFD1-216ENST00000555550 PIAS3Q9Y6X2 628 aa3.48□□□□□ -1.85
SCFD1-216ENST00000555550 ARID4BQ4LE39 1312 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-216ENST00000555550 STK36Q9NRP7 1315 aa3.47□□□□□ -1.85
SCFD1-216ENST00000555550 OR2M5A3KFT3 312 aa3.47□□□□□ -1.85
SCFD1-216ENST00000555550 LIPT2A6NK58 231 aa3.47□□□□□ -1.85
SCFD1-216ENST00000555550 NR5A2O00482 541 aa3.47□□□□□ -1.85
SCFD1-216ENST00000555550 GPR137BO60478 399 aa3.47□□□□□ -1.85
SCFD1-216ENST00000555550 TBX18O95935 607 aa3.47□□□□□ -1.85
SCFD1-216ENST00000555550 PLA2G4BP0C869 781 aa3.47□□□□□ -1.85
SCFD1-216ENST00000555550 CHMP24386 653 aa3.47□□□□□ -1.85
SCFD1-216ENST00000555550 PSMC4P43686 418 aa3.47□□□□□ -1.85
SCFD1-216ENST00000555550 LMO4P61968 165 aa3.47□□□□□ -1.85
SCFD1-216ENST00000555550 RPS18P62269 152 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms