RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PIGQQ9BRB3 760 aa2.57□□□□□ -2
SRP54-207ENST00000555535 LAT2Q9GZY6 243 aa2.57□□□□□ -2
SRP54-207ENST00000555535 PIGMQ9H3S5 423 aa2.57□□□□□ -2
SRP54-207ENST00000555535 VEZTQ9HBM0 779 aa2.57□□□□□ -2
SRP54-207ENST00000555535 PCDHB16Q9NRJ7 776 aa2.57□□□□□ -2
SRP54-207ENST00000555535 CELA1Q9UNI1 258 aa2.57□□□□□ -2
SRP54-207ENST00000555535 EIF4E1BA6NMX2 242 aaKnown RBP2.56□□□□□ -2
SRP54-207ENST00000555535 PLK4O00444 970 aa2.56□□□□□ -2
SRP54-207ENST00000555535 ATP2A1O14983 1001 aa2.56□□□□□ -2
SRP54-207ENST00000555535 JRKO75564 520 aa2.56□□□□□ -2
SRP54-207ENST00000555535 BMP10O95393 424 aa2.56□□□□□ -2
SRP54-207ENST00000555535 GCNT3O95395 438 aa2.56□□□□□ -2
SRP54-207ENST00000555535 RAF1P04049 648 aa2.56□□□□□ -2
SRP54-207ENST00000555535 ICAM1P05362 532 aa2.56□□□□□ -2
SRP54-207ENST00000555535 POLBP06746 335 aa2.56□□□□□ -2
SRP54-207ENST00000555535 HMBSP08397 361 aa2.56□□□□□ -2
SRP54-207ENST00000555535 SLC6A12P48065 614 aa2.56□□□□□ -2
SRP54-207ENST00000555535 PGFP49763 221 aa2.56□□□□□ -2
SRP54-207ENST00000555535 RHBDL3P58872 404 aa2.56□□□□□ -2
SRP54-207ENST00000555535 SNRPD1P62314 119 aaKnown RBP2.56□□□□□ -2
SRP54-207ENST00000555535 KCNJ10P78508 379 aa2.56□□□□□ -2
SRP54-207ENST00000555535 NEXNQ0ZGT2 675 aa2.56□□□□□ -2
SRP54-207ENST00000555535 DCTN2Q13561 401 aaKnown RBP2.56□□□□□ -2
SRP54-207ENST00000555535 RAPSNQ13702 412 aa2.56□□□□□ -2
SRP54-207ENST00000555535 CAPRIN1Q14444 709 aaKnown RBP2.56□□□□□ -2
SRP54-207ENST00000555535 BAK1Q16611 211 aa2.56□□□□□ -2
SRP54-207ENST00000555535 CTU2Q2VPK5 515 aaKnown RBP2.56□□□□□ -2
SRP54-207ENST00000555535 GLIPR1L2Q4G1C9 344 aa2.56□□□□□ -2
SRP54-207ENST00000555535 ZNF805Q5CZA5 627 aa2.56□□□□□ -2
SRP54-207ENST00000555535 SLC9C2Q5TAH2 1124 aa2.56□□□□□ -2
SRP54-207ENST00000555535 NDUFAF5Q5TEU4 345 aa2.56□□□□□ -2
SRP54-207ENST00000555535 TSSK4Q6SA08 328 aa2.56□□□□□ -2
SRP54-207ENST00000555535 Q6ZVH6 145 aa2.56□□□□□ -2
SRP54-207ENST00000555535 PTOV1Q86YD1 416 aa2.56□□□□□ -2
SRP54-207ENST00000555535 SLC34A3Q8N130 599 aa2.56□□□□□ -2
SRP54-207ENST00000555535 EMC1Q8N766 993 aa2.56□□□□□ -2
SRP54-207ENST00000555535 PAF1Q8N7H5 531 aa2.56□□□□□ -2
SRP54-207ENST00000555535 OR2T12Q8NG77 320 aa2.56□□□□□ -2
SRP54-207ENST00000555535 SLC47A1Q96FL8 570 aa2.56□□□□□ -2
SRP54-207ENST00000555535 TMEM68Q96MH6 324 aa2.56□□□□□ -2
SRP54-207ENST00000555535 SEMA3CQ99985 751 aa2.56□□□□□ -2
SRP54-207ENST00000555535 PRKRIP1Q9H875 184 aaPredicted RBP2.56□□□□□ -2
SRP54-207ENST00000555535 TBX20Q9UMR3 447 aa2.56□□□□□ -2
SRP54-207ENST00000555535 A0A087WW49 117 aa2.55□□□□□ -2
SRP54-207ENST00000555535 TDRD15B5MCY1 1934 aaKnown RBP2.55□□□□□ -2
SRP54-207ENST00000555535 PLPP2O43688 288 aa2.55□□□□□ -2
SRP54-207ENST00000555535 DUS4LO95620 317 aaKnown RBP2.55□□□□□ -2
SRP54-207ENST00000555535 SELLP14151 372 aa2.55□□□□□ -2
SRP54-207ENST00000555535 CTCFP49711 727 aaPredicted RBP2.55□□□□□ -2
SRP54-207ENST00000555535 THOP1P52888 689 aa2.55□□□□□ -2
SRP54-207ENST00000555535 CD81P60033 236 aa2.55□□□□□ -2
SRP54-207ENST00000555535 TLE2Q04725 743 aa2.55□□□□□ -2
SRP54-207ENST00000555535 EIF4EBP2Q13542 120 aaPredicted RBP2.55□□□□□ -2
SRP54-207ENST00000555535 PDE1CQ14123 709 aaPredicted RBP2.55□□□□□ -2
SRP54-207ENST00000555535 PNLIPRP3Q17RR3 467 aa2.55□□□□□ -2
SRP54-207ENST00000555535 ASPRV1Q53RT3 343 aa2.55□□□□□ -2
SRP54-207ENST00000555535 FAM69AQ5T7M9 428 aa2.55□□□□□ -2
SRP54-207ENST00000555535 Q6ZSR9 355 aa2.55□□□□□ -2
SRP54-207ENST00000555535 SDCCAG8Q86SQ7 713 aaPredicted RBP2.55□□□□□ -2
SRP54-207ENST00000555535 ISCA2Q86U28 154 aa2.55□□□□□ -2
SRP54-207ENST00000555535 PLD3Q8IV08 490 aa2.55□□□□□ -2
SRP54-207ENST00000555535 GCSAMQ8N6F7 178 aa2.55□□□□□ -2
SRP54-207ENST00000555535 SEMA4DQ92854 862 aa2.55□□□□□ -2
SRP54-207ENST00000555535 HVCN1Q96D96 273 aa2.55□□□□□ -2
SRP54-207ENST00000555535 EGLN2Q96KS0 407 aa2.55□□□□□ -2
SRP54-207ENST00000555535 ARPC5LQ9BPX5 153 aa2.55□□□□□ -2
SRP54-207ENST00000555535 SIL1Q9H173 461 aa2.55□□□□□ -2
SRP54-207ENST00000555535 SLC25A18Q9H1K4 315 aa2.55□□□□□ -2
SRP54-207ENST00000555535 MAGIXQ9H6Y5 334 aa2.55□□□□□ -2
SRP54-207ENST00000555535 MBNL1Q9NR56 388 aaKnown RBP2.55□□□□□ -2
SRP54-207ENST00000555535 GGA3Q9NZ52 723 aa2.55□□□□□ -2
SRP54-207ENST00000555535 B3GALT5Q9Y2C3 310 aa2.55□□□□□ -2
SRP54-207ENST00000555535 YIPF1Q9Y548 306 aa2.55□□□□□ -2
SRP54-207ENST00000555535 ARHGEF40Q8TER5 1519 aa2.54□□□□□ -2
SRP54-207ENST00000555535 IGHV4-4A0A075B6R2 117 aa2.54□□□□□ -2
SRP54-207ENST00000555535 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.54□□□□□ -2
SRP54-207ENST00000555535 AP2A2O94973 939 aa2.54□□□□□ -2
SRP54-207ENST00000555535 CSPG5O95196 566 aa2.54□□□□□ -2
SRP54-207ENST00000555535 LDHAP00338 332 aaKnown RBP2.54□□□□□ -2
SRP54-207ENST00000555535 F9P00740 461 aa2.54□□□□□ -2
SRP54-207ENST00000555535 PRB2P02812 416 aaPredicted RBP2.54□□□□□ -2
SRP54-207ENST00000555535 HRH2P25021 359 aa2.54□□□□□ -2
SRP54-207ENST00000555535 HALP42357 657 aa2.54□□□□□ -2
SRP54-207ENST00000555535 HNRNPA3P51991 378 aaKnown RBP2.54□□□□□ -2
SRP54-207ENST00000555535 CTSCP53634 463 aa2.54□□□□□ -2
SRP54-207ENST00000555535 P2RY6Q15077 328 aa2.54□□□□□ -2
SRP54-207ENST00000555535 ARHGEF16Q5VV41 709 aa2.54□□□□□ -2
SRP54-207ENST00000555535 ALS2CLQ60I27 953 aa2.54□□□□□ -2
SRP54-207ENST00000555535 PAQR6Q6TCH4 344 aa2.54□□□□□ -2
SRP54-207ENST00000555535 SLC16A9Q7RTY1 509 aa2.54□□□□□ -2
SRP54-207ENST00000555535 C1orf52Q8N6N3 182 aaKnown RBP2.54□□□□□ -2
SRP54-207ENST00000555535 OLIG1Q8TAK6 271 aa2.54□□□□□ -2
SRP54-207ENST00000555535 SMPDL3BQ92485 455 aa2.54□□□□□ -2
SRP54-207ENST00000555535 TMEM143Q96AN5 459 aa2.54□□□□□ -2
SRP54-207ENST00000555535 RNF125Q96EQ8 232 aa2.54□□□□□ -2
SRP54-207ENST00000555535 MMABQ96EY8 250 aaPredicted RBP2.54□□□□□ -2
SRP54-207ENST00000555535 GIMAP5Q96F15 307 aa2.54□□□□□ -2
SRP54-207ENST00000555535 NR1H4Q96RI1 486 aaPredicted RBP2.54□□□□□ -2
SRP54-207ENST00000555535 GFI1Q99684 422 aa2.54□□□□□ -2
SRP54-207ENST00000555535 GPATCH1Q9BRR8 931 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms