RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LOXL2Q9Y4K0 774 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 NFS1Q9Y697 457 aa3.05□□□□□ -1.92
SCFD1-213ENST00000554776 ATXN2Q99700 1313 aaKnown RBP3.04□□□□□ -1.92
SCFD1-213ENST00000554776 LOC100509620A0A075B734 347 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 A8MXE2 369 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 MAGEB17A8MXT2 336 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 FAM90A26D6RGX4 464 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 PLK4O00444 970 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 HS3ST1O14792 307 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 SLC16A5O15375 505 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 CREG1O75629 220 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 RFPL2O75678 378 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 KDM4BO94953 1096 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 CSPG5O95196 566 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 CLDN14O95500 239 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 PMS2P2O95744 297 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 GH2P01242 217 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 LINC00271P0C7V0 271 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 DAOP14920 347 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 GJA1P17302 382 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 EEF1DP29692 281 aaKnown RBP3.04□□□□□ -1.92
SCFD1-213ENST00000554776 CORO1AP31146 461 aaKnown RBP3.04□□□□□ -1.92
SCFD1-213ENST00000554776 CCR3P51677 355 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 RAD23AP54725 363 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 SEC61BP60468 96 aaKnown RBP3.04□□□□□ -1.92
SCFD1-213ENST00000554776 RPL36AP83881 106 aaKnown RBP3.04□□□□□ -1.92
SCFD1-213ENST00000554776 ROR1Q01973 937 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF155Q12901 538 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-213ENST00000554776 COASYQ13057 564 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 SNTA1Q13424 505 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 CALCRLQ16602 461 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 DECR1Q16698 335 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 C18orf63Q68DL7 685 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 LCN10Q6JVE6 187 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 PAPD4Q6PIY7 484 aaKnown RBP3.04□□□□□ -1.92
SCFD1-213ENST00000554776 SPSB3Q6PJ21 355 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 IL27RAQ6UWB1 636 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 INTS8Q75QN2 995 aaKnown RBP3.04□□□□□ -1.92
SCFD1-213ENST00000554776 GALNTL5Q7Z4T8 443 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 CAMKMTQ7Z624 323 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 SLFN11Q7Z7L1 901 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 ANKRD23Q86SG2 305 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 CEP57Q86XR8 500 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 GALNT13Q8IUC8 556 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 EPHX4Q8IUS5 362 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 MCEMP1Q8IX19 187 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF595Q8IYB9 648 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 EMC1Q8N766 993 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 SLC4A11Q8NBS3 891 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 WDR20Q8TBZ3 569 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 TAS1R2Q8TE23 839 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 UTP15Q8TED0 518 aaKnown RBP3.04□□□□□ -1.92
SCFD1-213ENST00000554776 TAAR8Q969N4 342 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 NXNL1Q96CM4 212 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 SIPA1Q96FS4 1042 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 CCDC34Q96HJ3 373 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 ADGRG7Q96K78 797 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 LMLNQ96KR4 655 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 C3orf30Q96M34 536 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 FER1L6-AS2Q96M78 137 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 DUX5Q96PT3 197 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 NAA11Q9BSU3 229 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-213ENST00000554776 C1QTNF4Q9BXJ3 329 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 GPR88Q9GZN0 384 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 TBC1D17Q9HA65 648 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 OLAHQ9NV23 265 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 SMARCAL1Q9NZC9 954 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF224Q9NZL3 707 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 AMACRQ9UHK6 382 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 FBXL2Q9UKC9 423 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 TAF1P21675 1872 aa3.04□□□□□ -1.92
SCFD1-213ENST00000554776 PLSCR5A0PG75 271 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 DENND3A2RUS2 1198 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 H0YIN7 160 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 MID1O15344 667 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 TRUB2O95900 331 aaKnown RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 SRCP12931 536 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 UGT1A1P22309 533 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 AZGP1P25311 298 aaKnown RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 PEX5P50542 639 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 ARSEP51690 589 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF41P51814 821 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 CSE1LP55060 971 aaKnown RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 ERVFC1-1P60608 527 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 ISL1P61371 349 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 PDE1BQ01064 536 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 EEF1A2Q05639 463 aaKnown RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 ILF3Q12906 894 aaKnown RBP eCLIP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 RALGDSQ12967 914 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 COG2Q14746 738 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 SF3B4Q15427 424 aaKnown RBP eCLIP3.03□□□□□ -1.924e-7■■□□□ 13.4
SCFD1-213ENST00000554776 SYT16Q17RD7 645 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 CRY2Q49AN0 593 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 KRTCAP3Q53RY4 240 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 TCP11X2Q5H9J9 407 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 FRG2Q64ET8 278 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 DHRS7BQ6IAN0 325 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-213ENST00000554776 SUSD1Q6UWL2 747 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 GPR180Q86V85 440 aa3.03□□□□□ -1.92
SCFD1-213ENST00000554776 ODF3L1Q8IXM7 274 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms