RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 NFE2L1Q14494 772 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 SEMA3AQ14563 771 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 ITIH4Q14624 930 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 ISXQ2M1V0 245 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 LYPLAL1Q5VWZ2 237 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 CERS6Q6ZMG9 384 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 RBM44Q6ZP01 1051 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 JAMLQ86YT9 394 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 AGGF1Q8N302 714 aaeCLIP12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 MFSD3Q96ES6 412 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 SIGLEC10Q96LC7 697 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 DEPDC7Q96QD5 511 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 GFM1Q96RP9 751 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 KRT12Q99456 494 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 MARCH4Q9P2E8 410 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 CPNE7Q9UBL6 633 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 WDR37Q9Y2I8 494 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 DMXL2Q8TDJ6 3036 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 ZZEF1O43149 2961 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 C17orf113A0A1B0GUU1 675 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 FAM237BA0A1B0GVD1 139 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 C1QTNF9BB2RNN3 333 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 CD3EAPO15446 510 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 TTI1O43156 1089 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 OR1I1O60431 355 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 CSO75390 466 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 AP2A2O94973 939 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 VAPBO95292 243 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 CAPNS1P04632 268 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 C1QTNF9P0C862 333 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 SLC19A1P41440 591 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 NSG1P42857 185 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 ARCN1P48444 511 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 PDX1P52945 283 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 HHEXQ03014 270 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 SQSTM1Q13501 440 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 DHX34Q14147 1143 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 SPIDRQ14159 915 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 CLCA4Q14CN2 919 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 SEPT7Q16181 437 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 ZNF658BQ4V348 819 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 FASTKD1Q53R41 847 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 PACS1Q6VY07 963 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 PCGF5Q86SE9 256 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 TMEM135Q86UB9 458 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 SLC9B2Q86UD5 537 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 HOOK3Q86VS8 718 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 CFAP206Q8IYR0 622 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 GRAMD1AQ96CP6 724 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 C16orf45Q96MC5 204 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 CNTNAP3BQ96NU0 1288 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 FCRL3Q96P31 734 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 TRIM56Q9BRZ2 755 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 CCM2Q9BSQ5 444 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 CNTNAP3Q9BZ76 1288 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 CATSPERZQ9NTU4 200 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 ACSL5Q9ULC5 683 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 PCDHB1Q9Y5F3 818 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 PRSS21Q9Y6M0 314 aa12.67□□□□□ -0.38
MTHFD1-209ENST00000554768 LAMA5O15230 3695 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 IGHV1OR21-1A0A087WYE8 117 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 PRAMEF33A0A0G2JMD5 474 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 OR52A4PA6NMU1 304 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 D6RAR5 112 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 TP73O15350 636 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 ZW10O43264 779 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 PBLDP30039 288 aaPredicted RBP12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 AMZ1Q400G9 498 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 ANKRD20A4Q4UJ75 823 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 NKAIN2Q5VXU1 208 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 IZUMO3Q5VZ72 239 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 CASC4Q6P4E1 433 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 UNQ6494/PRO21346Q6UXR6 183 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 USP53Q70EK8 1073 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 TMPRSS9Q7Z410 1059 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 LDB1Q86U70 411 aaPredicted RBP12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 ZNF761Q86XN6 746 aaPredicted RBP12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 AVL9Q8NBF6 648 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 SH3KBP1Q96B97 665 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 TTC1Q99614 292 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 SLC38A3Q99624 504 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 TRIM51Q9BSJ1 452 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 SYNDIG1Q9H7V2 258 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 SLC40A1Q9NP59 571 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 KCNK4Q9NYG8 393 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 ANAPC5Q9UJX4 755 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 ATXN7L1Q9ULK2 861 aaPredicted RBP12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 PSMD13Q9UNM6 376 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 ENTPD2Q9Y5L3 495 aa12.66□□□□□ -0.38
MTHFD1-209ENST00000554768 ZCWPW2A0A1B0GU75 182 aa12.65□□□□□ -0.38
MTHFD1-209ENST00000554768 GOLGA8KD6RF30 607 aa12.65□□□□□ -0.38
MTHFD1-209ENST00000554768 GOLGA8TH3BQL2 631 aa12.65□□□□□ -0.38
MTHFD1-209ENST00000554768 CPNE6O95741 557 aa12.65□□□□□ -0.38
MTHFD1-209ENST00000554768 VIPP01282 170 aa12.65□□□□□ -0.38
MTHFD1-209ENST00000554768 POLBP06746 335 aa12.65□□□□□ -0.38
MTHFD1-209ENST00000554768 GSTM1P09488 218 aa12.65□□□□□ -0.38
MTHFD1-209ENST00000554768 PPARGP37231 505 aaPredicted RBP12.65□□□□□ -0.38
MTHFD1-209ENST00000554768 HALP42357 657 aa12.65□□□□□ -0.38
MTHFD1-209ENST00000554768 TTPAP49638 278 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms