RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 TRNAU1APQ9NX07 287 aaKnown RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 DTLQ9NZJ0 730 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 PPARGC1AQ9UBK2 798 aaKnown RBP4.81□□□□□ -1.64
ATXN3-229ENST00000554672 ZNF212Q9UDV6 495 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 MOSPD1Q9UJG1 213 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 KCND3Q9UK17 655 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 RCOR1Q9UKL0 485 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 STAP1Q9ULZ2 295 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 POLHQ9Y253 713 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 COQ6Q9Y2Z9 468 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 SNX10Q9Y5X0 201 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 ACTL7AQ9Y615 435 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 RPS6KL1Q9Y6S9 549 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 FLNCQ14315 2725 aa4.81□□□□□ -1.64
ATXN3-229ENST00000554672 MYH10P35580 1976 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ICE1Q9Y2F5 2266 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ABCA12Q86UK0 2595 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 PIPSLA2A3N6 862 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ZSCAN5CA6NGD5 496 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 C9orf118A6NHY6 69 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 TCP11X1B4DZS4 312 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 I6L893 689 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 POLR1CO15160 346 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 MATN3O15232 486 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 PPM1DO15297 605 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 HNRNPRO43390 633 aaKnown RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 THAP12O43422 761 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 BUB1O43683 1085 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 KDELR3O43731 214 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 DAB1O75553 588 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 STK17BO94768 372 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 IGSF6O95976 241 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 LDLRP01130 860 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 PCCBP05166 539 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 PFKFB1P16118 471 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 F8A1P23610 371 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 DLSTP36957 453 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ACVRL1P37023 503 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 SYKP43405 635 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 LEPRP48357 1165 aaKnown RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 PMS2P54278 862 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 PPP2R2AP63151 447 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 DEUP1Q05D60 604 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ILF3Q12906 894 aaKnown RBP eCLIP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 GRM3Q14832 879 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 FXNQ16595 210 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 SLC25A52Q3SY17 297 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 NADK2Q4G0N4 442 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 INO80DQ53TQ3 878 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ATXN7L2Q5T6C5 722 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ATP1A1-AS1Q5TC04 95 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 CPZQ66K79 652 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ANKRD40Q6AI12 368 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 FAM183BPQ6ZVS7 135 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 SLC26A9Q7LBE3 791 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 NRROSQ86YC3 692 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ZDHHC17Q8IUH5 632 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 DRC7Q8IY82 874 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 PLA2G15Q8NCC3 412 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 OR10G6Q8NH81 332 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 NT5C3BQ969T7 300 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 AHCYL2Q96HN2 611 aaKnown RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 C5orf34Q96MH7 638 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ZNF641Q96N77 438 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 CPXM1Q96SM3 734 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 CTRCQ99895 268 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 GTPBP4Q9BZE4 634 aaKnown RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 MAGEH1Q9H213 219 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 PCDH12Q9NPG4 1184 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 PPP4R1LQ9P1A2 415 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 TAAR2Q9P1P5 351 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ERRFI1Q9UJM3 462 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 PHTF1Q9UMS5 762 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 HPSEQ9Y251 543 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 COA3Q9Y2R0 106 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 ANKRD17O75179 2603 aaKnown RBP4.8□□□□□ -1.64
ATXN3-229ENST00000554672 RP1P56715 2156 aa4.8□□□□□ -1.64
ATXN3-229ENST00000554672 KIF26BQ2KJY2 2108 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 COL27A1Q8IZC6 1860 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-229ENST00000554672 FAM237AA0A1B0GTK4 181 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 TSPAN11A1L157 253 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 PRSS38A1L453 326 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 A8MU76 341 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 TEX33O43247 280 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 DLX3O60479 287 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 RAMP2O60895 175 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 LRCH4O75427 683 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 KATNA1O75449 491 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 CREG1O75629 220 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 RECQL5O94762 991 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-229ENST00000554672 SORBS2O94875 1100 aaKnown RBP4.79□□□□□ -1.64
ATXN3-229ENST00000554672 TMCC1O94876 653 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 ERBB2P04626 1255 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 ERCC5P28715 1186 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-229ENST00000554672 CSF2RBP32927 897 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 PRCPP42785 496 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 PPM1FP49593 454 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-229ENST00000554672 SULT1E1P49888 294 aa4.79□□□□□ -1.64
ATXN3-229ENST00000554672 PGDP52209 483 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms