RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 UGT1A10Q9HAW8 530 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 UGT1A8Q9HAW9 530 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 LUC7LQ9NQ29 371 aaKnown RBP18.41■□□□□ 0.54
CPSF2-203ENST00000554290 RSPH14Q9UHP6 348 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 PCDHB3Q9Y5E6 796 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 F5H423 210 aaPredicted RBP18.4■□□□□ 0.54
CPSF2-203ENST00000554290 FECHP22830 423 aa18.4■□□□□ 0.54
CPSF2-203ENST00000554290 SH3BP2P78314 561 aa18.4■□□□□ 0.54
CPSF2-203ENST00000554290 DMPKQ09013 629 aa18.4■□□□□ 0.54
CPSF2-203ENST00000554290 XRCC4Q13426 336 aa18.4■□□□□ 0.54
CPSF2-203ENST00000554290 FAM92BQ6ZTR7 304 aa18.4■□□□□ 0.54
CPSF2-203ENST00000554290 RASGEF1AQ8N9B8 481 aa18.4■□□□□ 0.54
CPSF2-203ENST00000554290 KLHL6Q8WZ60 621 aa18.4■□□□□ 0.54
CPSF2-203ENST00000554290 ZNF514Q96K75 400 aaPredicted RBP18.4■□□□□ 0.54
CPSF2-203ENST00000554290 GOLPH3Q9H4A6 298 aa18.4■□□□□ 0.54
CPSF2-203ENST00000554290 WDR37Q9Y2I8 494 aa18.4■□□□□ 0.54
CPSF2-203ENST00000554290 STX7O15400 261 aaKnown RBP18.39■□□□□ 0.53
CPSF2-203ENST00000554290 BUD23O43709 281 aaKnown RBP18.39■□□□□ 0.53
CPSF2-203ENST00000554290 KIF1CO43896 1103 aaKnown RBP18.39■□□□□ 0.53
CPSF2-203ENST00000554290 ANXA9O76027 345 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 NDUFA10O95299 355 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 CCNYL3P0C7X3 344 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 FGF5P12034 268 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 DLSTP36957 453 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 GEMP55040 296 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 SEPT6Q14141 434 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 SPA17Q15506 151 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 LONRF2Q1L5Z9 754 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 DEFB109BQ30KR1 87 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 GPRC6AQ5T6X5 926 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 CCDC181Q5TID7 509 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 C11orf63Q6NUN7 778 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 C16orf46Q6P387 395 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 TMEM220Q6QAJ8 160 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 BBS12Q6ZW61 710 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 PTRH1Q86Y79 214 aaKnown RBP18.39■□□□□ 0.53
CPSF2-203ENST00000554290 C9orf43Q8TAL5 461 aaPredicted RBP18.39■□□□□ 0.53
CPSF2-203ENST00000554290 UBXN4Q92575 508 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 STAMBPL1Q96FJ0 436 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 HEMGNQ9BXL5 484 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 PDE7BQ9NP56 450 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 PSMD13Q9UNM6 376 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 BOD1L1Q8NFC6 3051 aa18.39■□□□□ 0.53
CPSF2-203ENST00000554290 OR2AG2A6NM03 316 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 H7C0C1 242 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 APOC4-APOC2K7ER74 178 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 KIAA0754O94854 1291 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 LCA5LO95447 670 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 APOC2P02655 101 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 ZNF28P17035 718 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 NELFEP18615 380 aaKnown RBP18.38■□□□□ 0.53
CPSF2-203ENST00000554290 MSH3P20585 1137 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 OAS2P29728 719 aaKnown RBP18.38■□□□□ 0.53
CPSF2-203ENST00000554290 AKT1P31749 480 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 ATP5OP48047 213 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 CTSCP53634 463 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 RPE65Q16518 533 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.38■□□□□ 0.53
CPSF2-203ENST00000554290 ITPRIPL1Q6GPH6 555 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 DAAM2Q86T65 1068 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 PPP1R3BQ86XI6 285 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 CCDC170Q8IYT3 715 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 GALNT6Q8NCL4 622 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 ZNF398Q8TD17 642 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 ELMO2Q96JJ3 720 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 SMOXQ9NWM0 555 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 KCND3Q9UK17 655 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 KCTD3Q9Y597 815 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 PCDHA13Q9Y5I0 950 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 MYO18BQ8IUG5 2567 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 SPTA1P02549 2419 aa18.38■□□□□ 0.53
CPSF2-203ENST00000554290 TLN1Q9Y490 2541 aaKnown RBP18.38■□□□□ 0.53
CPSF2-203ENST00000554290 KLHL33A6NCF5 533 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 C2orf81A6NN90 581 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 SPAG6O75602 509 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 MT-ND3P03897 115 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 LPOP22079 712 aaPredicted RBP18.37■□□□□ 0.53
CPSF2-203ENST00000554290 RBL1P28749 1068 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 MARCKSL1P49006 195 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 COPS2P61201 443 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 TLE1Q04724 770 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 NFE2L1Q14494 772 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 PLCL1Q15111 1095 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 FNBP1LQ5T0N5 605 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 METRNLQ641Q3 311 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 BEND7Q8N7W2 519 aaPredicted RBP18.37■□□□□ 0.53
CPSF2-203ENST00000554290 TC2NQ8N9U0 490 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 SIDT2Q8NBJ9 832 aaKnown RBP18.37■□□□□ 0.53
CPSF2-203ENST00000554290 FICDQ9BVA6 458 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 TRIM5Q9C035 493 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 GBA3Q9H227 469 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 LNPEPQ9UIQ6 1025 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 CROTQ9UKG9 612 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 PADI1Q9ULC6 663 aa18.37■□□□□ 0.53
CPSF2-203ENST00000554290 GOLGA6L3A6NEY3 463 aa18.36■□□□□ 0.53
CPSF2-203ENST00000554290 C5orf60A6NFR6 353 aa18.36■□□□□ 0.53
CPSF2-203ENST00000554290 MGAT4DA6NG13 374 aa18.36■□□□□ 0.53
CPSF2-203ENST00000554290 GAPDHSO14556 408 aaPredicted RBP18.36■□□□□ 0.53
CPSF2-203ENST00000554290 ARHGAP6O43182 974 aa18.36■□□□□ 0.53
CPSF2-203ENST00000554290 GPR39O43194 453 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms