RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 COILP38432 576 aaPredicted RBP20■□□□□ 0.79
FOXA1-203ENST00000553751 SLC19A1P41440 591 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 PRLHRP49683 370 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 CFHR1Q03591 330 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 ACVR1Q04771 509 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 LAMB3Q13751 1172 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 NFE2L1Q14494 772 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 TPSAB1Q15661 275 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 CCDC137Q6PK04 289 aaKnown RBP20■□□□□ 0.79
FOXA1-203ENST00000553751 ZNF574Q6ZN55 896 aaPredicted RBP20■□□□□ 0.79
FOXA1-203ENST00000553751 ZNF534Q76KX8 674 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 SERPINA9Q86WD7 417 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 LSMEM2Q8N112 164 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 HEXDCQ8WVB3 486 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 SH3KBP1Q96B97 665 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 LINC00615Q96LM1 132 aaPredicted RBP20■□□□□ 0.79
FOXA1-203ENST00000553751 ASCL3Q9NQ33 180 aa20■□□□□ 0.79
FOXA1-203ENST00000553751 TCRBV7S3A2A0A539 114 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 CCDC162PA2VCL2 907 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 LILRA5A6NI73 299 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 OR52A4PA6NMU1 304 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 CFAP99D6REC4 459 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 PHF2O75151 1096 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 KRT14P02533 472 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 ATP1B2P14415 290 aaPredicted RBP19.99■□□□□ 0.79
FOXA1-203ENST00000553751 PBLDP30039 288 aaPredicted RBP19.99■□□□□ 0.79
FOXA1-203ENST00000553751 FOXN2P32314 431 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 MAGEA6P43360 314 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 VPS41P49754 854 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 EPHA4P54764 986 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 CCDC173Q0VFZ6 552 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 GPS1Q13098 491 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 EIF3IQ13347 325 aaKnown RBP19.99■□□□□ 0.79
FOXA1-203ENST00000553751 KCNJ11Q14654 390 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 DBN1Q16643 649 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 TAS2R42Q7RTR8 314 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 PPHLN1Q8NEY8 458 aaKnown RBP19.99■□□□□ 0.79
FOXA1-203ENST00000553751 OR2L2Q8NH16 312 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 OR10G6Q8NH81 332 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 SNIP1Q8TAD8 396 aaKnown RBP19.99■□□□□ 0.79
FOXA1-203ENST00000553751 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.99■□□□□ 0.79
FOXA1-203ENST00000553751 UCK1Q9HA47 277 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 POT1Q9NUX5 634 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 NEU2Q9Y3R4 380 aa19.99■□□□□ 0.79
FOXA1-203ENST00000553751 IGHV5-10-1A0A0J9YXX1 117 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 KLHL33A6NCF5 533 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 MGAT4DA6NG13 374 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 PLD2O14939 933 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 DUX1O43812 170 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 HOXB3P14651 431 aaPredicted RBP19.98■□□□□ 0.79
FOXA1-203ENST00000553751 TCP1P17987 556 aaKnown RBP19.98■□□□□ 0.79
FOXA1-203ENST00000553751 FNTAP49354 379 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 SESN2P58004 480 aaPredicted RBP19.98■□□□□ 0.79
FOXA1-203ENST00000553751 GNG11P61952 73 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 CDK16Q00536 496 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 CLCA4Q14CN2 919 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 PHF19Q5T6S3 580 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 METRNLQ641Q3 311 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 FOXR1Q6PIV2 292 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 RAB11FIP2Q7L804 512 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 NLRP9Q7RTR0 991 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 TRIM48Q8IWZ4 208 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 OR4D9Q8NGE8 314 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 PEX13Q92968 403 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 ZNF578Q96N58 590 aaPredicted RBP19.98■□□□□ 0.79
FOXA1-203ENST00000553751 SLC46A1Q96NT5 459 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 TBC1D10AQ9BXI6 508 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 TMEM9Q9P0T7 183 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 LOXL2Q9Y4K0 774 aa19.98■□□□□ 0.79
FOXA1-203ENST00000553751 URB1O60287 2271 aaKnown RBP19.98■□□□□ 0.79
FOXA1-203ENST00000553751 PRAMEF33A0A0G2JMD5 474 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 GOLGA6L10A0A0M3HER8 536 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 GOT2P00505 430 aaKnown RBP19.97■□□□□ 0.79
FOXA1-203ENST00000553751 VIPP01282 170 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 THRAP10827 490 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 HGFP14210 728 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 LIMK2P53671 638 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 ERVPABLB-1P60509 514 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 CRADDP78560 199 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 C16orf72Q14CZ0 275 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 PCID2Q5JVF3 399 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 PAPD7Q5XG87 772 aaKnown RBP19.97■□□□□ 0.79
FOXA1-203ENST00000553751 LRRC8BQ6P9F7 803 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 AFTPHQ6ULP2 937 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 TMEM26Q6ZUK4 368 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 FGF11Q92914 225 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 HDAC10Q969S8 669 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 AHCYL2Q96HN2 611 aaKnown RBP19.97■□□□□ 0.79
FOXA1-203ENST00000553751 CCDC74BQ96LY2 380 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 DPYSL5Q9BPU6 564 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 IL22Q9GZX6 179 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 SLC40A1Q9NP59 571 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 CHRAC1Q9NRG0 131 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 PSMD13Q9UNM6 376 aa19.97■□□□□ 0.79
FOXA1-203ENST00000553751 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.97■□□□□ 0.79
FOXA1-203ENST00000553751 AP3B1O00203 1094 aa19.96■□□□□ 0.79
FOXA1-203ENST00000553751 FANCGO15287 622 aa19.96■□□□□ 0.79
FOXA1-203ENST00000553751 ITGA2BP08514 1039 aa19.96■□□□□ 0.79
FOXA1-203ENST00000553751 RBMS1P29558 406 aaKnown RBP19.96■□□□□ 0.79
FOXA1-203ENST00000553751 HALP42357 657 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms