RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SMPDL3BQ92485 455 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 SLX1AQ9BQ83 275 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 RAB6CQ9H0N0 254 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 ERVMER34-1Q9H9K5 563 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 YIPF1Q9Y548 306 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 PBRM1Q86U86 1689 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 A0A1W2PQF6 199 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 A6NL46 340 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 TCERG1O14776 1098 aaKnown RBP3.63□□□□□ -1.83
SCFD1-210ENST00000553693 TGFB1I1O43294 461 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 WISP2O76076 250 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 CCNDBP1O95273 360 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 MLYCDO95822 493 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 PBX3P40426 434 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 PIK3CAP42336 1068 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 CEBPZQ03701 1054 aaKnown RBP3.63□□□□□ -1.83
SCFD1-210ENST00000553693 FAAP20Q6NZ36 180 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 MFSD6Q6ZSS7 791 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 R3HCC1LQ7Z5L2 792 aaKnown RBP3.63□□□□□ -1.83
SCFD1-210ENST00000553693 SMC5Q8IY18 1101 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 RASGEF1CQ8N431 466 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 DDHD1Q8NEL9 900 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 ANKRD9Q96BM1 317 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-210ENST00000553693 SENP5Q96HI0 755 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-210ENST00000553693 EGLN2Q96KS0 407 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 PSD2Q9BQI7 771 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 PDZD7Q9H5P4 517 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 FGF22Q9HCT0 170 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 PREBQ9HCU5 417 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 ECHDC1Q9NTX5 307 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 ZDHHC18Q9NUE0 388 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 RCC2Q9P258 522 aaKnown RBP3.63□□□□□ -1.83
SCFD1-210ENST00000553693 LIMA1Q9UHB6 759 aaKnown RBP3.63□□□□□ -1.83
SCFD1-210ENST00000553693 R3HDM2Q9Y2K5 976 aaKnown RBP3.63□□□□□ -1.83
SCFD1-210ENST00000553693 RNF215Q9Y6U7 377 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 MAPKBP1O60336 1514 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 ABCA10Q8WWZ4 1543 aa3.63□□□□□ -1.83
SCFD1-210ENST00000553693 ABCA5Q8WWZ7 1642 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 TSPOAP1O95153 1857 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 SH2B2O14492 632 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-210ENST00000553693 ZBTB43O43298 467 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 CLPTM1O96005 669 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 CD48P09326 243 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 LIFP15018 202 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 ZNF26P17031 533 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-210ENST00000553693 ITGA3P26006 1051 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 MAP2K2P36507 400 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 MMP15P51511 669 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 KCNJ10P78508 379 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 NIPAL4Q0D2K0 466 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 MFAP5Q13361 173 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 TUBB2AQ13885 445 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 MVPQ14764 893 aaKnown RBP3.62□□□□□ -1.83
SCFD1-210ENST00000553693 ALS2CLQ60I27 953 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 CYP20A1Q6UW02 462 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 FASTKD5Q7L8L6 764 aaKnown RBP3.62□□□□□ -1.83
SCFD1-210ENST00000553693 ARHGAP12Q8IWW6 846 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 DIS3L2Q8IYB7 885 aaKnown RBP3.62□□□□□ -1.83
SCFD1-210ENST00000553693 LYG1Q8N1E2 194 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 FRMD1Q8N878 549 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 TRPC4APQ8TEL6 797 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 LINC00479Q96M42 142 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 TBATAQ96M53 351 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 TUBB2BQ9BVA1 445 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 RRP7BPQ9NSQ0 103 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 KCNJ14Q9UNX9 436 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 KCNE2Q9Y6J6 123 aa3.62□□□□□ -1.83
SCFD1-210ENST00000553693 FHAD1B1AJZ9 1412 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 ADAMTS12P58397 1594 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 SLCO1B7G3V0H7 640 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 H3BQ06 376 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-210ENST00000553693 SCAMP1O15126 338 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 SMAD9O15198 467 aaKnown RBP3.61□□□□□ -1.83
SCFD1-210ENST00000553693 GPR137BO60478 399 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 SYNCRIPO60506 623 aaKnown RBP3.61□□□□□ -1.83
SCFD1-210ENST00000553693 TMCC2O75069 709 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 EML2O95834 649 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 HIST1H2ABP04908 130 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 CLEC3BP05452 202 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 ACTN1P12814 892 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 HIST1H2ADP20671 130 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 CLK1P49759 484 aaKnown RBP3.61□□□□□ -1.83
SCFD1-210ENST00000553693 CASP6P55212 293 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 HSP90AB4PQ58FF6 505 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 LRIF1Q5T3J3 769 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 ZDHHC20Q5W0Z9 365 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 TPRG1Q6ZUI0 275 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 HIST3H2AQ7L7L0 130 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 ISCA2Q86U28 154 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 GTSCR1Q86UQ5 136 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 PTOV1Q86YD1 416 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 NGEFQ8N5V2 710 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 PPHLN1Q8NEY8 458 aaKnown RBP3.61□□□□□ -1.83
SCFD1-210ENST00000553693 OR8K5Q8NH50 307 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 MOAP1Q96BY2 351 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 ZNF653Q96CK0 615 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 ZNF689Q96CS4 500 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-210ENST00000553693 NUDCD1Q96RS6 583 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 RHNO1Q9BSD3 238 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms