RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 MASP2O00187 686 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 CHUKO15111 745 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 LDB2O43679 373 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 KLF7O75840 302 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-204ENST00000553605 SLC25A14O95258 325 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-204ENST00000553605 UNGP13051 313 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-204ENST00000553605 MMP13P45452 471 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 NSFP46459 744 aaKnown RBP13.48□□□□□ -0.25
PRPF39-204ENST00000553605 ARCN1P48444 511 aaKnown RBP13.48□□□□□ -0.25
PRPF39-204ENST00000553605 RPL7AP62424 266 aaKnown RBP13.48□□□□□ -0.25
PRPF39-204ENST00000553605 ABRQ12979 859 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 PTCHD3Q3KNS1 767 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 PPP1R15BQ5SWA1 713 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 FCRL6Q6DN72 434 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 ADGRG6Q86SQ4 1221 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 LRRTM4Q86VH4 590 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 HSCBQ8IWL3 235 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 COG1Q8WTW3 980 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 CCDC120Q96HB5 630 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 MCEEQ96PE7 176 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 KCTD15Q96SI1 283 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-204ENST00000553605 TIMM29Q9BSF4 260 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 DHRS4Q9BTZ2 278 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 STK33Q9BYT3 514 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 ACTR5Q9H9F9 607 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-204ENST00000553605 ATP13A2Q9NQ11 1180 aa13.48□□□□□ -0.25
PRPF39-204ENST00000553605 ANKHD1Q8IWZ3 2542 aaKnown RBP13.48□□□□□ -0.25
PRPF39-204ENST00000553605 RGSL1A5PLK6 1076 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 C9J4A7 227 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 KCNN4O15554 427 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 MAFKO60675 156 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 LCA5LO95447 670 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 CALB1P05937 261 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 UCHL3P15374 230 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 DESP17661 470 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 IL4RP24394 825 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 HALP42357 657 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 KCNK10P57789 538 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 OTUD4Q01804 1114 aaKnown RBP13.47□□□□□ -0.25
PRPF39-204ENST00000553605 ZNF169Q14929 603 aaPredicted RBP13.47□□□□□ -0.25
PRPF39-204ENST00000553605 PPP6R3Q5H9R7 873 aaPredicted RBP13.47□□□□□ -0.25
PRPF39-204ENST00000553605 ERMARDQ5T6L9 678 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 B3GNTL1Q67FW5 361 aaPredicted RBP13.47□□□□□ -0.25
PRPF39-204ENST00000553605 DUS1LQ6P1R4 473 aaKnown RBP13.47□□□□□ -0.25
PRPF39-204ENST00000553605 DNAJC24Q6P3W2 148 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 FAM180AQ6UWF9 173 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 NSMCE1Q8WV22 266 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 DPH2Q9BQC3 489 aaPredicted RBP13.47□□□□□ -0.25
PRPF39-204ENST00000553605 SLC7A5P2Q9GIP4 190 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 NDST4Q9H3R1 872 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 FANCEQ9HB96 536 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 OLAHQ9NV23 265 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 HRASLS2Q9NWW9 162 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 SOHLH2Q9NX45 425 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 P4HTMQ9NXG6 502 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 DTLQ9NZJ0 730 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 PKD2L2Q9NZM6 624 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 RWDD2AQ9UIY3 292 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 CHKBQ9Y259 395 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 WDR37Q9Y2I8 494 aa13.47□□□□□ -0.25
PRPF39-204ENST00000553605 C1orf232A0A0U1RR37 186 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 TCRBV5S1A1TA0A578 114 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 OR5K3A6NET4 321 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 CCL21O00585 134 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 DDX3YO15523 660 aaKnown RBP13.46□□□□□ -0.25
PRPF39-204ENST00000553605 GFPT2O94808 682 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 CYP2A7P20853 494 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 AGXTP21549 392 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 ADCY2Q08462 1091 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 ITKQ08881 620 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 MAN2A1Q16706 1144 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 ANKRD20A8PQ5CZ79 823 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 RPTNQ6XPR3 784 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 PHF13Q86YI8 300 aaPredicted RBP13.46□□□□□ -0.25
PRPF39-204ENST00000553605 ZNF547Q8IVP9 402 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 BCORP1Q8N888 145 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 GPR150Q8NGU9 434 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 CCHCR1Q8TD31 782 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 C14orf79Q96F83 325 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 GBP5Q96PP8 586 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 PCDHB18PQ96TA0 734 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 SNRNP25Q9BV90 132 aaKnown RBP13.46□□□□□ -0.25
PRPF39-204ENST00000553605 TLR10Q9BXR5 811 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 NT5MQ9NPB1 228 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 BTRCQ9Y297 605 aa13.46□□□□□ -0.25
PRPF39-204ENST00000553605 TRGV8A0A0C4DH27 118 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 VEGFDO43915 354 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 CD99P14209 185 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 HCAR3P49019 387 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 OGDHQ02218 1023 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 TLR1Q15399 786 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 ASIC2Q16515 512 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 SMTNL2Q2TAL5 461 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 VWA3BQ502W6 1294 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 ZNF789Q5FWF6 425 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 ZNF569Q5MCW4 686 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 MLIPQ5VWP3 458 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 MTFR2Q6P444 385 aa13.45□□□□□ -0.26
PRPF39-204ENST00000553605 DCUN1D2Q6PH85 259 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms