RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 MTHFD2P13995 350 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 BPIP17213 487 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 CEBPBP17676 345 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 CTPS1P17812 591 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 NCF2P19878 526 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 MPSTP25325 297 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 VIPR1P32241 457 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 PGM1P36871 562 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 EIF2DP41214 584 aaKnown RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 PIK3CGP48736 1102 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 MRPL19P49406 292 aaKnown RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 DGKGP49619 791 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 ACADVLP49748 655 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 CCR3P51677 355 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 PKNOX1P55347 436 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 ARHGAP8P85298 464 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 KLF10Q13118 480 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 STX5Q13190 355 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 ARHGEF7Q14155 803 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 PCBP2Q15366 365 aaKnown RBP eCLIP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 TRMT5Q32P41 509 aaKnown RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 LSM12Q3MHD2 195 aaKnown RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 ELOA3BQ3SY89 546 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 SLC9B1Q4ZJI4 515 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 SETMARQ53H47 684 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 CTSL3PQ5NE16 218 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 CRTC1Q6UUV9 634 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 C16orf89Q6UX73 402 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 TMEM184AQ6ZMB5 413 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 ATG14Q6ZNE5 492 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 DPY19L3Q6ZPD9 716 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 RNF165Q6ZSG1 346 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 CHSY3Q70JA7 882 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 NET1Q7Z628 596 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 TTC7BQ86TV6 843 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 PIM3Q86V86 326 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 GPSM1Q86YR5 675 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 TREML1Q86YW5 311 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 NRSN1Q8IZ57 195 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 MYO1HQ8N1T3 1032 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 SPATA6LQ8N4H0 392 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 PTGR2Q8N8N7 351 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 FAM13CQ8NE31 585 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 TTC16Q8NEE8 873 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 VN1R2Q8NFZ6 395 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 ELOA3Q8NG57 546 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 BPIFB1Q8TDL5 484 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 FRS2Q8WU20 508 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 UTP4Q969X6 686 aaKnown RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 FUBP1Q96AE4 644 aaKnown RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 PTERQ96BW5 349 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 EID2BQ96D98 161 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 LINGO1Q96FE5 620 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 MRGPRX3Q96LB0 322 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 MAGEB10Q96LZ2 347 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 COPS8Q99627 209 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 NUF2Q9BZD4 464 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 GSX2Q9BZM3 304 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 SAP130Q9H0E3 1048 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 SMG9Q9H0W8 520 aaKnown RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 TNKS2Q9H2K2 1166 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF385DQ9H6B1 395 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 DCLRE1BQ9H816 532 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 BRD9Q9H8M2 597 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 BPIFA1Q9NP55 256 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 KCTD5Q9NXV2 234 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 UTP6Q9NYH9 597 aaKnown RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 GTSE1Q9NYZ3 720 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 ARMCX1Q9P291 453 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 CRLS1Q9UJA2 301 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 PRPF19Q9UMS4 504 aaKnown RBP7.22□□□□□ -1.25
ATXN3-221ENST00000553498 PLA2G4CQ9UP65 541 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 FAM50BQ9Y247 325 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 NUMBLQ9Y6R0 609 aa7.22□□□□□ -1.25
ATXN3-221ENST00000553498 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-221ENST00000553498 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-221ENST00000553498 NPIPB15A6NHN6 443 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-221ENST00000553498 UPK3BL1B0FP48 263 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 SUPT3HB4E1H0 165 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 UPK3BL2E5RIL1 263 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 SDHDO14521 159 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 SCAMP3O14828 347 aaKnown RBP7.21□□□□□ -1.26
ATXN3-221ENST00000553498 AZIN1O14977 448 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 NPC1O15118 1278 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 UBDO15205 165 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 SLC16A5O15375 505 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 DCXO43602 365 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 NIPSNAP2O75323 286 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 SUPT3HO75486 399 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 GPC4O75487 556 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 ECI2O75521 394 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 CLDN7O95471 211 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 ESRRBO95718 433 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 GSTM1P09488 218 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 CISD3P0C7P0 127 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 COX4I1P13073 169 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 MSH3P20585 1137 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 KCNA5P22460 613 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 SPINT3P49223 89 aa7.21□□□□□ -1.26
ATXN3-221ENST00000553498 MXRA7P84157 204 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms