RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TROAPQ12815 778 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 DLG1Q12959 904 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 GAGE2BQ13066 116 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 GAGE2EQ4V326 116 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 FAM109BQ6ICB4 259 aaPredicted RBP5.02□□□□□ -1.61
SYNE2-210ENST00000553455 GAGE2AQ6NT46 116 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 GFRALQ6UXV0 394 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 SATL1Q86VE3 508 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 TMEM219Q86XT9 240 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 MAP7D3Q8IWC1 876 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 TSPAN14Q8NG11 270 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 ELP5Q8TE02 316 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 ARSGQ96EG1 525 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 CFAP57Q96MR6 1250 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 C16orf70Q9BSU1 422 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 GAREM1Q9H706 876 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 ANKZF1Q9H8Y5 726 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 SELENONQ9NZV5 590 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 GAGE2DQ9UEU5 116 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 KCNS2Q9ULS6 477 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 PCDHAC2Q9Y5I4 1007 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 PRAG1Q86YV5 1406 aa5.02□□□□□ -1.61
SYNE2-210ENST00000553455 A0A1W2PPM1 405 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 MYMKA6NI61 221 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 HEPACAM2A8MVW5 462 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 SLC16A5O15375 505 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 FCGR1AP12314 374 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 HLA-DOBP13765 273 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 ITGA2P17301 1181 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 KCNJ4P48050 445 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 ISL1P61371 349 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 HNRNPKP61978 463 aaKnown RBP eCLIP5.01□□□□□ -1.61
SYNE2-210ENST00000553455 TUBA1BP68363 451 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 CAMK2DQ13557 499 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 C6orf163Q5TEZ5 329 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 CST9LP1Q5W188 147 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 IL27RAQ6UWB1 636 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 RAD9BQ6WBX8 426 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 TMPRSS12Q86WS5 348 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 VSIG1Q86XK7 387 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 C1orf52Q8N6N3 182 aaKnown RBP5.01□□□□□ -1.61
SYNE2-210ENST00000553455 OR52I2Q8NH67 350 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 SCARB1Q8WTV0 552 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 ZNF653Q96CK0 615 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 SPACA9Q96E40 222 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-210ENST00000553455 TMEM19Q96HH6 336 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 ABHD6Q9BV23 337 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 SEZ6LQ9BYH1 1024 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 EDEM3Q9BZQ6 932 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 SEMA6AQ9H2E6 1030 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 OPA3Q9H6K4 179 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 SLA2Q9H6Q3 261 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 EQTNQ9NQ60 294 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 MBNL1Q9NR56 388 aaKnown RBP5.01□□□□□ -1.61
SYNE2-210ENST00000553455 RHCGQ9UBD6 479 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 OR2W1Q9Y3N9 320 aa5.01□□□□□ -1.61
SYNE2-210ENST00000553455 EDDM13A0A1B0GTR0 161 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 OR5K3A6NET4 321 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 PROB1E7EW31 1015 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 SSX4O60224 188 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 LDB3O75112 727 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 FYNP06241 537 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 QDPRP09417 244 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 GABRA5P31644 462 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 MATR3P43243 847 aaKnown RBP eCLIP5□□□□□ -1.61
SYNE2-210ENST00000553455 HTR6P50406 440 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 SEC61A1P61619 476 aaKnown RBP5□□□□□ -1.61
SYNE2-210ENST00000553455 RALGDSQ12967 914 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 ZNF234Q14588 700 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 COG2Q14746 738 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 CCDC184Q52MB2 194 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 FIGLAQ6QHK4 219 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 CHST3Q7LGC8 479 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 CCDC186Q7Z3E2 898 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 IQCHQ86VS3 1027 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 ADHFE1Q8IWW8 467 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 RNF113BQ8IZP6 322 aaKnown RBP5□□□□□ -1.61
SYNE2-210ENST00000553455 IQCF1Q8N6M8 205 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 PI4KAP1Q8N8J0 262 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 ZFAND2BQ8WV99 257 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 SECISBP2LQ93073 1101 aaKnown RBP5□□□□□ -1.61
SYNE2-210ENST00000553455 ZNF479Q96JC4 524 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 PRMT6Q96LA8 375 aaPredicted RBP5□□□□□ -1.61
SYNE2-210ENST00000553455 FER1L6-AS2Q96M78 137 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 ZNF582Q96NG8 517 aaPredicted RBP5□□□□□ -1.61
SYNE2-210ENST00000553455 MS4A10Q96PG2 267 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 OR6C1Q96RD1 312 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 NTPCRQ9BSD7 190 aaKnown RBP5□□□□□ -1.61
SYNE2-210ENST00000553455 NAA11Q9BSU3 229 aaPredicted RBP5□□□□□ -1.61
SYNE2-210ENST00000553455 CSTL1Q9H114 145 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 CNOT10Q9H9A5 744 aaKnown RBP5□□□□□ -1.61
SYNE2-210ENST00000553455 PRMT7Q9NVM4 692 aaPredicted RBP5□□□□□ -1.61
SYNE2-210ENST00000553455 WNT16Q9UBV4 365 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 IL17BQ9UHF5 180 aa5□□□□□ -1.61
SYNE2-210ENST00000553455 DDX25Q9UHL0 483 aaKnown RBP5□□□□□ -1.61
SYNE2-210ENST00000553455 A0A0B4J293 547 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 C5orf60A6NFR6 353 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 OVOL3O00110 214 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 DIAPH2O60879 1101 aa4.99□□□□□ -1.61
SYNE2-210ENST00000553455 CAMTA2O94983 1202 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms