RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 SULT1C3Q6IMI6 304 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 AGMOQ6ZNB7 445 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 FRA10AC1Q70Z53 315 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 CDYL2Q8N8U2 506 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 HASPINQ8TF76 798 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 SLC39A13Q96H72 371 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 SH3YL1Q96HL8 342 aaPredicted RBP17.34■□□□□ 0.37
SYNE3-202ENST00000553340 FEM1AQ9BSK4 669 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 DGCR6LQ9BY27 220 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 DNAJB9Q9UBS3 223 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 ANKRD36A6QL64 1941 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 OR4F21O95013 312 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 TBX4P57082 545 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 BTG3Q14201 252 aaPredicted RBP17.34■□□□□ 0.37
SYNE3-202ENST00000553340 MEP1AQ16819 746 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 LDLRAP1Q5SW96 308 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 FAM126BQ8IXS8 530 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 GPR21Q99679 349 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 HMG20AQ9NP66 347 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 SMPD4Q9NXE4 827 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 DAPK2Q9UIK4 370 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 DGKBQ9Y6T7 804 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 M0QZ92 97 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 NDUFS3O75489 264 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 IDUAP35475 653 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 TOP3AQ13472 1001 aaPredicted RBP17.34■□□□□ 0.37
SYNE3-202ENST00000553340 AQP6Q13520 282 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 TTC30BQ8N4P2 665 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 TAMM41Q96BW9 452 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 OSBPL10Q9BXB5 764 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 SMURF2Q9HAU4 748 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 ATAD3AQ9NVI7 634 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 DOCK4Q8N1I0 1966 aa17.33■□□□□ 0.37
SYNE3-202ENST00000553340 TRIM43BA6NCK2 446 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 IFRD1O00458 451 aaPredicted RBP17.33■□□□□ 0.36
SYNE3-202ENST00000553340 RAMP2O60895 175 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 DNAJB5O75953 348 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 HTR1AP08908 422 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 PWP1Q13610 501 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 ZNF235Q14590 738 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 Q6ZSR9 355 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 FKBP9P1Q75LS8 142 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 SCN4BQ8IWT1 228 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 PARP8Q8N3A8 854 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 MUL1Q969V5 352 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 ESAMQ96AP7 390 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 ABHD8Q96I13 439 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 MBOAT4Q96T53 435 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 HEBP1Q9NRV9 189 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 ENPP5Q9UJA9 477 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 CPQQ9Y646 472 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 PATJQ8NI35 1801 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 KATNA1O75449 491 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 CST1P01037 141 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 ALDH2P05091 517 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 HTR1BP28222 390 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 RXRGP48443 463 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 OXCT1P55809 520 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 CACNB2Q08289 660 aaPredicted RBP17.33■□□□□ 0.36
SYNE3-202ENST00000553340 TRIM32Q13049 653 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 OXA1LQ15070 435 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 SLC16A12Q6ZSM3 486 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 DCBLD1Q8N8Z6 715 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 PJA1Q8NG27 643 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 OR8J3Q8NGG0 315 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 FIG4Q92562 907 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 RBM4BQ9BQ04 359 aaKnown RBP17.33■□□□□ 0.36
SYNE3-202ENST00000553340 C17orf80Q9BSJ5 609 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 RBM4Q9BWF3 364 aaKnown RBP17.33■□□□□ 0.36
SYNE3-202ENST00000553340 MROQ9BYG7 248 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 AMBRA1Q9C0C7 1298 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 WDR12Q9GZL7 423 aaKnown RBP17.33■□□□□ 0.36
SYNE3-202ENST00000553340 GORASP2Q9H8Y8 452 aa17.33■□□□□ 0.36
SYNE3-202ENST00000553340 PTPRDP23468 1912 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 TTC3P53804 2025 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 PCNTO95613 3336 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 M0QZQ0 153 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 GNGT2O14610 69 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 GSTA4O15217 222 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 NOBOXO60393 691 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 POMCP01189 267 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 G6PDP11413 515 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 NR4A1P22736 598 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 ARL1P40616 181 aaPredicted RBP17.32■□□□□ 0.36
SYNE3-202ENST00000553340 IST1P53990 364 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 RAD23AP54725 363 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 PPP2R2BQ00005 443 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 PLEKHH3Q7Z736 793 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 MON1AQ86VX9 555 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 SVOPLQ8N434 492 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 OR2T12Q8NG77 320 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 FBXO30Q8TB52 745 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 ZNF583Q96ND8 569 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 CCDC115Q96NT0 180 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 ALPK1Q96QP1 1244 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 ZNF382Q96SR6 550 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 NLE1Q9NVX2 485 aaPredicted RBP17.32■□□□□ 0.36
SYNE3-202ENST00000553340 CD274Q9NZQ7 290 aa17.32■□□□□ 0.36
SYNE3-202ENST00000553340 EIF2B4Q9UI10 523 aaKnown RBP17.32■□□□□ 0.36
SYNE3-202ENST00000553340 TRIM17Q9Y577 477 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms