RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ITGA1P56199 1179 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 TUBB4BP68371 445 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 HSD11B2P80365 405 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 RAPSNQ13702 412 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 TUBB2AQ13885 445 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 PLCL1Q15111 1095 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 RPE65Q16518 533 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 PCSK7Q16549 785 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 IZUMO3Q5VZ72 239 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 FAM83HQ6ZRV2 1179 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-209ENST00000553308 BPHLQ86WA6 291 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-209ENST00000553308 KMT5CQ86Y97 462 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 TICAM1Q8IUC6 712 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 RHOT1Q8IXI2 618 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 D2HGDHQ8N465 521 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 PQLC3Q8N755 202 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 ENDOVQ8N8Q3 282 aaKnown RBP8.88□□□□□ -0.99
SYNE2-209ENST00000553308 CCNYQ8ND76 341 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 PNPLA2Q96AD5 504 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 ZNF501Q96CX3 271 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-209ENST00000553308 PPM1MQ96MI6 270 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 ZNF670Q9BS34 389 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 TUBB2BQ9BVA1 445 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 GPR63Q9BZJ6 419 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 MAGEE1Q9HCI5 957 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 RAD18Q9NS91 495 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 IP6K2Q9UHH9 426 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 SNX7Q9UNH6 387 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 PSMD13Q9UNM6 376 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 HIVEP3Q5T1R4 2406 aa8.88□□□□□ -0.99
SYNE2-209ENST00000553308 SSU72P8A0A1W2PR75 194 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 UBA6A0AVT1 1052 aaPredicted RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 OR5K3A6NET4 321 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 CBX6O95503 412 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 VCLP18206 1134 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 MX2P20592 715 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 TNFRSF8P28908 595 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 PBLDP30039 288 aaPredicted RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 ARCN1P48444 511 aaKnown RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 CTSCP53634 463 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 IFI35P80217 286 aaPredicted RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 TMEM115Q12893 351 aaPredicted RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 ABRQ12979 859 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 ATP1A4Q13733 1029 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 GTF2H3Q13889 308 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 NFE2L1Q14494 772 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 STX1AQ16623 288 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 ATP13A5Q4VNC0 1218 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 PLEKHS1Q5SXH7 462 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 DUS1LQ6P1R4 473 aaKnown RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 KLHL35Q6PF15 583 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 FBXO38Q6PIJ6 1188 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 FAM198BQ6UWH4 519 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 DSELQ8IZU8 1212 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 KCTD6Q8NC69 237 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 GDAP1Q8TB36 358 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 FAF2Q96CS3 445 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 SNRNP40Q96DI7 357 aaKnown RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 VPS35Q96QK1 796 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 RANBP9Q96S59 729 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 CD180Q99467 661 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 SMAD5Q99717 465 aaKnown RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 TLR10Q9BXR5 811 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 BPIFA1Q9NP55 256 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 RTN4Q9NQC3 1192 aaKnown RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 KCND1Q9NSA2 647 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 IMP3Q9NV31 184 aaKnown RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 ASF1BQ9NVP2 202 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 ANO10Q9NW15 660 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 GPR83Q9NYM4 423 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 CHMP5Q9NZZ3 219 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 TCFL5Q9UL49 500 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 G3BP2Q9UN86 482 aaKnown RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 SPO11Q9Y5K1 396 aa8.87□□□□□ -0.99
SYNE2-209ENST00000553308 CFAP20Q9Y6A4 193 aaKnown RBP8.87□□□□□ -0.99
SYNE2-209ENST00000553308 OR2AG2A6NM03 316 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 MEN1O00255 615 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 POP7O75817 140 aaKnown RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 LCA5LO95447 670 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 ZBTB11O95625 1053 aaPredicted RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 CYP1A2P05177 515 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 KLK3P07288 261 aaPredicted RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 CAPN1P07384 714 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 RAB40ALP0C0E4 278 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 MTHFD1P11586 935 aaKnown RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 VARSP26640 1264 aaKnown RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 CA5AP35218 305 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 RORAP35398 523 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 KPNA2P52292 529 aaKnown RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 VAV2P52735 878 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 GSDMDP57764 484 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 TAS2R40P59535 323 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 PPIDQ08752 370 aaKnown RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 DMPKQ09013 629 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 HADHQ16836 314 aaKnown RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 PLEKHN1Q494U1 663 aaPredicted RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 ZRANB3Q5FWF4 1079 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 C1QL3Q5VWW1 255 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 SASS6Q6UVJ0 657 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 AMZ2Q86W34 360 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms