RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 Q8N9G6 341 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-226ENST00000553011 OR6C4Q8NGE1 309 aa13.87□□□□□ -0.19
PTCH1-226ENST00000553011 SGSM3Q96HU1 749 aa13.87□□□□□ -0.19
PTCH1-226ENST00000553011 DPH5Q9H2P9 285 aa13.87□□□□□ -0.19
PTCH1-226ENST00000553011 SYNDIG1Q9H7V2 258 aa13.87□□□□□ -0.19
PTCH1-226ENST00000553011 IL1RAPL1Q9NZN1 696 aa13.87□□□□□ -0.19
PTCH1-226ENST00000553011 ANAPC5Q9UJX4 755 aa13.87□□□□□ -0.19
PTCH1-226ENST00000553011 MRFAP1Q9Y605 127 aa13.87□□□□□ -0.19
PTCH1-226ENST00000553011 DNMT3AQ9Y6K1 912 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-226ENST00000553011 RPS6KL1Q9Y6S9 549 aa13.87□□□□□ -0.19
PTCH1-226ENST00000553011 ZCWPW2A0A1B0GU75 182 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 MAGEB16A2A368 324 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 MGAT4DA6NG13 374 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 RHPN2P1A8MT19 583 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 PPM1DO15297 605 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 NUDT21O43809 227 aaKnown RBP13.86□□□□□ -0.19
PTCH1-226ENST00000553011 BRAFP15056 766 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 NSG1P42857 185 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 ARCN1P48444 511 aaKnown RBP13.86□□□□□ -0.19
PTCH1-226ENST00000553011 DMPKQ09013 629 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 BIRC2Q13490 618 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 LYPLAL1Q5VWZ2 237 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 XKR5Q6UX68 686 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 PACS1Q6VY07 963 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 CERS6Q6ZMG9 384 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 TMPRSS7Q7RTY8 843 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 TMEM135Q86UB9 458 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 ZNF761Q86XN6 746 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-226ENST00000553011 LILRA3Q8N6C8 439 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-226ENST00000553011 OTUD6BQ8N6M0 293 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 OR2L2Q8NH16 312 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 KIF18AQ8NI77 898 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 STAMBPL1Q96FJ0 436 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 LINC00615Q96LM1 132 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-226ENST00000553011 ERP44Q9BS26 406 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 ABCG4Q9H172 646 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 WDR37Q9Y2I8 494 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 ACACAQ13085 2346 aa13.86□□□□□ -0.19
PTCH1-226ENST00000553011 MAP1BP46821 2468 aaKnown RBP13.86□□□□□ -0.19
PTCH1-226ENST00000553011 KIR2DS5A0A0G2JLQ3 304 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 A0A0G2JNG1 304 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 A0A1W2PQM1 296 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 OR52A4PA6NMU1 304 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 KIR2DS3K7RE56 304 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 KCNJ13O60928 360 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 MT-CO3P00414 261 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 SLC2A4P14672 509 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 PAMP19021 973 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 FASLGP48023 281 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 CCL7P80098 99 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 SHC2P98077 582 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 KIR2DS5Q14953 304 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 CLCA4Q14CN2 919 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 DNAJC21Q5F1R6 531 aaKnown RBP13.85□□□□□ -0.19
PTCH1-226ENST00000553011 AARS2Q5JTZ9 985 aaKnown RBP13.85□□□□□ -0.19
PTCH1-226ENST00000553011 HP1BP3Q5SSJ5 553 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-226ENST00000553011 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-226ENST00000553011 AGAP9Q5VTM2 703 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 CDCP2Q5VXM1 449 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 DUPD1Q68J44 220 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 ABRAXAS1Q6UWZ7 409 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 ZNF438Q7Z4V0 828 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 SPRED1Q7Z699 444 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 TMPRSS12Q86WS5 348 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 CCNJLQ8IV13 435 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 IGDCC3Q8IVU1 814 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 PDIK1LQ8N165 341 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 GALNT15Q8N3T1 639 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 HM13Q8TCT9 377 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 TTC1Q99614 292 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 CCM2Q9BSQ5 444 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 ZNF624Q9P2J8 865 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-226ENST00000553011 CPNE7Q9UBL6 633 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 ANGPTL2Q9UKU9 493 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 PSMD13Q9UNM6 376 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 APC2O95996 2303 aa13.85□□□□□ -0.19
PTCH1-226ENST00000553011 PRAMEF33A0A0G2JMD5 474 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 OR5K4A6NMS3 321 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 SMAPO00193 183 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 B4GAT1O43505 415 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 USP1O94782 785 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 AP2A2O94973 939 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 RPLP0P05388 317 aaKnown RBP13.84□□□□□ -0.19
PTCH1-226ENST00000553011 POLBP06746 335 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 F7P08709 466 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-226ENST00000553011 JUPP14923 745 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 PNLIPP16233 465 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 PGAM1P18669 254 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 ALDH4A1P30038 563 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 PPARGP37231 505 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-226ENST00000553011 SLC19A1P41440 591 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 ELK3P41970 407 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 TTPAP49638 278 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 ARL4CP56559 192 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 OR1D5P58170 312 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 UBE2IP63279 158 aaKnown RBP13.84□□□□□ -0.19
PTCH1-226ENST00000553011 FOXK2Q01167 660 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 HHEXQ03014 270 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 HIF1AQ16665 826 aa13.84□□□□□ -0.19
PTCH1-226ENST00000553011 ZNF658BQ4V348 819 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms