RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 PCDHB3Q9Y5E6 796 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 CPQQ9Y646 472 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 SLC30A1Q9Y6M5 507 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 XPNPEP2O43895 674 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 HS6ST1O60243 411 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 FKTNO75072 461 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 CNOT3O75175 753 aaKnown RBP12.22□□□□□ -0.45
HDAC7-230ENST00000552960 SOAT2O75908 522 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 GLP2RO95838 553 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 MAGP20916 626 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 HRH2P25021 359 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 FMO4P31512 558 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 GGT5P36269 586 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 HPCAL1P37235 193 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 OR1G1P47890 313 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 GPR15P49685 360 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 DAG1Q14118 895 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 SELPLGQ14242 412 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 TSNQ15631 228 aaKnown RBP12.22□□□□□ -0.45
HDAC7-230ENST00000552960 XAF1Q6GPH4 301 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 PM20D1Q6GTS8 502 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 ZNF555Q8NEP9 628 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 OR13C4Q8NGS5 318 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 PXYLP1Q8TE99 480 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 ZFP90Q8TF47 636 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 C17orf80Q9BSJ5 609 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 HPS4Q9NQG7 708 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 LIMD1Q9UGP4 676 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 TCRBV5S2A0A599 114 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 ASPDHA6ND91 283 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 C16orf96A6NNT2 1141 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 G3V2T6 193 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 CHEK2O96017 543 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 FSHRP23945 695 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 PCYT1AP49585 367 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 NRG1Q02297 640 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-230ENST00000552960 GALNT1Q10472 559 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-230ENST00000552960 GALNT3Q14435 633 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 ATP6AP1LQ52LC2 224 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 TTC9BQ8N6N2 239 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 FAM86B1Q8N7N1 296 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 SLC22A17Q8WUG5 538 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 PTCD2Q8WV60 388 aaKnown RBP12.22□□□□□ -0.45
HDAC7-230ENST00000552960 NCLNQ969V3 563 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 L3HYPDHQ96EM0 354 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 SH3YL1Q96HL8 342 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-230ENST00000552960 TSGA13Q96PP4 275 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 THUMPD3Q9BV44 507 aaKnown RBP12.22□□□□□ -0.45
HDAC7-230ENST00000552960 SP110Q9HB58 689 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 GALPQ9UBC7 116 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 LEF1Q9UJU2 399 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-230ENST00000552960 UTS2RQ9UKP6 389 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 PNMA8BQ9ULN7 279 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-230ENST00000552960 PDE10AQ9Y233 779 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 MYO9BQ13459 2157 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 CASP8AP2Q9UKL3 1982 aa12.22□□□□□ -0.45
HDAC7-230ENST00000552960 SOBPA7XYQ1 873 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 NDUFB5O43674 189 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 SEC14L2O76054 403 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 GOT2P00505 430 aaKnown RBP12.21□□□□□ -0.45
HDAC7-230ENST00000552960 HTR1BP28222 390 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 PIGAP37287 484 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 ALDH3A2P51648 485 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 FAM98BQ52LJ0 330 aaKnown RBP12.21□□□□□ -0.45
HDAC7-230ENST00000552960 MARC1Q5VT66 337 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 ANKS6Q68DC2 871 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 UGT3A1Q6NUS8 523 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 PAQR3Q6TCH7 311 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 CCDC80Q76M96 950 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 TMEM173Q86WV6 379 aaPredicted RBP12.21□□□□□ -0.45
HDAC7-230ENST00000552960 FAM126BQ8IXS8 530 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 ZCCHC7Q8N3Z6 543 aaKnown RBP12.21□□□□□ -0.45
HDAC7-230ENST00000552960 DTWD1Q8N5C7 304 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.21□□□□□ -0.453e-6■■■■□ 24.3
HDAC7-230ENST00000552960 EPS8L2Q9H6S3 715 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 HMG20AQ9NP66 347 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 POLR3BQ9NW08 1133 aaPredicted RBP12.21□□□□□ -0.45
HDAC7-230ENST00000552960 GIN1Q9NXP7 522 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 GPR45Q9Y5Y3 372 aa12.21□□□□□ -0.45
HDAC7-230ENST00000552960 HHLA1C9JL84 531 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 ARVCFO00192 962 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 CDC7O00311 574 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 KATNA1O75449 491 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 NADKO95544 446 aaPredicted RBP12.21□□□□□ -0.46
HDAC7-230ENST00000552960 CST1P01037 141 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 CRHBPP24387 322 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 CA8P35219 290 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 TUSC3Q13454 348 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 FAM26DQ5JW98 314 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 TMEM236Q5W0B7 351 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 ZNF549Q6P9A3 640 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 ADCK1Q86TW2 530 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 PHYKPLQ8IUZ5 450 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 COLGALT2Q8IYK4 626 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 DPF3Q92784 378 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 TUBA1CQ9BQE3 449 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 HGH1Q9BTY7 390 aa12.21□□□□□ -0.46
HDAC7-230ENST00000552960 MOXD2PA6NHM9 499 aa12.2□□□□□ -0.46
HDAC7-230ENST00000552960 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms