RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 EIF3CLB5ME19 914 aaKnown RBP11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 F8VZ95 297 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 DFFAO00273 331 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 TRBC1P01850 177 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 BRAFP15056 766 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 UCHL3P15374 230 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 RRADP55042 308 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 PDE1BQ01064 536 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 ACY1Q03154 408 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 ATP1A4Q13733 1029 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 IHHQ14623 411 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 PLEKHS1Q5SXH7 462 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 ABRAXAS1Q6UWZ7 409 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 WASH2PQ6VEQ5 465 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 RAD9BQ6WBX8 426 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 GDF7Q7Z4P5 450 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 CUZD1Q86UP6 607 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 KMT5CQ86Y97 462 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 PHF13Q86YI8 300 aaPredicted RBP11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 PHYKPLQ8IUZ5 450 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 RBM12BQ8IXT5 1001 aaKnown RBP11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 D2HGDHQ8N465 521 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 ENDOVQ8N8Q3 282 aaKnown RBP11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 OR8K1Q8NGG5 319 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 IQCDQ96DY2 449 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 CALR3Q96L12 384 aaKnown RBP11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 EIF3CQ99613 913 aaKnown RBP11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 CHP1Q99653 195 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 DESI2Q9BSY9 194 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 SELENOOQ9BVL4 669 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 LATS2Q9NRM7 1088 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 KLC4Q9NSK0 619 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 TRMT1Q9NXH9 659 aaKnown RBP11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 ADAM22Q9P0K1 906 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 ATXN10Q9UBB4 475 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 OSGIN2Q9Y236 505 aa11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 KLF2Q9Y5W3 355 aaPredicted RBP11.14□□□□□ -0.63
SUPT16H-202ENST00000552829 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 EEF2KO00418 725 aaKnown RBP11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 CHUKO15111 745 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 STSP08842 583 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 EBLN1P0CF75 366 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 ZNF8P17098 575 aaPredicted RBP11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 CA5AP35218 305 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 RORAP35398 523 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 RPL7AP62424 266 aaKnown RBP11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 OGDHQ02218 1023 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 RAPSNQ13702 412 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 GPR18Q14330 331 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 ZNF235Q14590 738 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 MYBPC3Q14896 1274 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 ASIC2Q16515 512 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 TDRD12Q587J7 1177 aaKnown RBP11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 AGAP9Q5VTM2 703 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 LYPLAL1Q5VWZ2 237 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 IRGCQ6NXR0 463 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 FAM198BQ6UWH4 519 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 TRIM72Q6ZMU5 477 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 RFX8Q6ZV50 586 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 DSELQ8IZU8 1212 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 ACRBPQ8NEB7 543 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 OR8K5Q8NH50 307 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 ZNF501Q96CX3 271 aaPredicted RBP11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 KCTD15Q96SI1 283 aaPredicted RBP11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 DNAJC7Q99615 494 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 ILKAPQ9H0C8 392 aaPredicted RBP11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 ZNF552Q9H707 407 aaPredicted RBP11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 KCND1Q9NSA2 647 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 POT1Q9NUX5 634 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 ZNHIT6Q9NWK9 470 aaKnown RBP11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 COPG2Q9UBF2 871 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 SNX7Q9UNH6 387 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 AP4E1Q9UPM8 1137 aa11.13□□□□□ -0.63
SUPT16H-202ENST00000552829 CACNA1CQ13936 2221 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 F5H423 210 aaPredicted RBP11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 MEN1O00255 615 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 MAFKO60675 156 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 SCRG1O75711 98 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 PRLP01236 227 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 HCAR3P49019 387 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 SPINT3P49223 89 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 SOX8P57073 446 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 TUBB4BP68371 445 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 TUBB2AQ13885 445 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 DPYSQ14117 519 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 SPOCD1Q6ZMY3 1216 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 CYP4V2Q6ZWL3 525 aaPredicted RBP11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 TMTC1Q8IUR5 882 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 TRIM48Q8IWZ4 208 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 ZNF295-AS1Q8N0V1 137 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 RELTQ969Z4 430 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 LYSMD1Q96S90 227 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 MAP3K3Q99759 626 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 TUBB2BQ9BVA1 445 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 DHX35Q9H5Z1 703 aaKnown RBP11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 AGPAT4Q9NRZ5 378 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 ITGB1BP2Q9UKP3 347 aa11.12□□□□□ -0.63
SUPT16H-202ENST00000552829 NUP210LQ5VU65 1888 aa11.11□□□□□ -0.63
SUPT16H-202ENST00000552829 A0A1B0GUH1 482 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms