RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 NR1D2Q14995 579 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 AGAP9Q5VTM2 703 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 ARMC3Q5W041 872 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 WASH2PQ6VEQ5 465 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 CERS6Q6ZMG9 384 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 PCGF5Q86SE9 256 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 PIANPQ8IYJ0 282 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 OR10G6Q8NH81 332 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 NAT14Q8WUY8 206 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 CXorf40BQ96DE9 158 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 AHCYL2Q96HN2 611 aaKnown RBP18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 C16orf45Q96MC5 204 aaPredicted RBP18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 WASH6PQ9NQA3 447 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 CATSPERZQ9NTU4 200 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 ATXN7L1Q9ULK2 861 aaPredicted RBP18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 SOX13Q9UN79 622 aa18.15■□□□□ 0.5
PRPF40B-216ENST00000552301 CHD8Q9HCK8 2581 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 TMX2-CTNND1H3BSU7 103 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 AP2A2O94973 939 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 CPNE6O95741 557 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 PAMP19021 973 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 NMBRP28336 390 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 ZNF449Q6P9G9 518 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 ABRAXAS1Q6UWZ7 409 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 MICALCLQ6ZW33 695 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 ZNF761Q86XN6 746 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 JAMLQ86YT9 394 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 OR2L2Q8NH16 312 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 HM13Q8TCT9 377 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 CCDC97Q96F63 343 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 LINC00615Q96LM1 132 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 TMEM74Q96NL1 305 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 SERPINB12Q96P63 405 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 KIFC1Q9BW19 673 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 STRADBQ9C0K7 418 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 NRSN2Q9GZP1 204 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 TREX1Q9NSU2 369 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 POT1Q9NUX5 634 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 PCDHB1Q9Y5F3 818 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 AK5Q9Y6K8 562 aa18.14■□□□□ 0.49
PRPF40B-216ENST00000552301 PRR19A6NJB7 356 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 SDR42E2A6NKP2 422 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 DNALI1O14645 258 aaPredicted RBP18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 B4GAT1O43505 415 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 DUX1O43812 170 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 AVILO75366 819 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 SLC35G4P0C7Q5 338 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 PTGIRP43119 386 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 MAPK9P45984 424 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 INHBCP55103 352 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 GPLD1P80108 840 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 CAMK2BQ13554 666 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 DHX34Q14147 1143 aaKnown RBP18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 CLPPQ16740 277 aaPredicted RBP18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 RNASEH2BQ5TBB1 312 aaKnown RBP18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 IZUMO3Q5VZ72 239 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 PACS1Q6VY07 963 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 FAM83HQ6ZRV2 1179 aaPredicted RBP18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 PIM3Q86V86 326 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 CAND1Q86VP6 1230 aaKnown RBP18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 NAT8LQ8N9F0 302 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 ZCCHC14Q8WYQ9 949 aaKnown RBP18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 KRT12Q99456 494 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 TMEM121BQ9BXQ6 578 aaPredicted RBP18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 CCDC86Q9H6F5 360 aaKnown RBP18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 EPB41L5Q9HCM4 733 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 SCHIP1Q9P0W5 487 aaPredicted RBP18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 ACSL5Q9ULC5 683 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 PSMD13Q9UNM6 376 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 ENTPD2Q9Y5L3 495 aa18.13■□□□□ 0.49
PRPF40B-216ENST00000552301 IGHV1OR21-1A0A087WYE8 117 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 OR52A4PA6NMU1 304 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 CASC3O15234 703 aaKnown RBP18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 FTH1P02794 183 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 PROS1P07225 676 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 GSTM1P09488 218 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 OR56A5P0C7T3 313 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 XRCC1P18887 633 aaPredicted RBP18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 TTPAP49638 278 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 UBE2IP63279 158 aaKnown RBP18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 GSTM4Q03013 218 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 CES3Q6UWW8 571 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 USP53Q70EK8 1073 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 HOOK3Q86VS8 718 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 CFAP206Q8IYR0 622 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 MPP5Q8N3R9 675 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 CLDN19Q8N6F1 224 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 ZNF669Q96BR6 464 aaPredicted RBP18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 MFSD3Q96ES6 412 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 ATXN7L3BQ96GX2 97 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 SGSM3Q96HU1 749 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 DPYSL5Q9BPU6 564 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 CCM2Q9BSQ5 444 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 FOXP3Q9BZS1 431 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 RDH14Q9HBH5 336 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 MAD1L1Q9Y6D9 718 aa18.12■□□□□ 0.49
PRPF40B-216ENST00000552301 PIKFYVEQ9Y2I7 2098 aa18.11■□□□□ 0.49
PRPF40B-216ENST00000552301 C17orf113A0A1B0GUU1 675 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms