RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TMEM202A6NGA9 273 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 URADA6NGE7 173 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 DAB1O75553 588 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 NDUFB4O95168 129 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 GJA1P17302 382 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 CD58P19256 250 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 TRIM21P19474 475 aaKnown RBP5.34□□□□□ -1.55
CPSF6-206ENST00000550987 CALRP27797 417 aaKnown RBP5.34□□□□□ -1.55
CPSF6-206ENST00000550987 PTH2RP49190 550 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 ZNF41P51814 821 aaPredicted RBP5.34□□□□□ -1.55
CPSF6-206ENST00000550987 PLIN5Q00G26 463 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 TFCP2Q12800 502 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 ALCAMQ13740 583 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 C2orf68Q2NKX9 166 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 DCAF6Q58WW2 860 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 KRT79Q5XKE5 535 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 HIST2H2BCQ6DN03 193 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 HIST2H2BDQ6DRA6 164 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 PRR5LQ6MZQ0 368 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 Q6ZPA2 131 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 AACSQ86V21 672 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 CEP97Q8IW35 865 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 MB21D2Q8IYB1 491 aaPredicted RBP5.34□□□□□ -1.55
CPSF6-206ENST00000550987 THNSL1Q8IYQ7 743 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 RBFAQ8N0V3 343 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 SLC44A5Q8NCS7 719 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 GOT1L1Q8NHS2 421 aaPredicted RBP5.34□□□□□ -1.55
CPSF6-206ENST00000550987 DUSP19Q8WTR2 217 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 TMEM174Q8WUU8 243 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 SLC35F5Q8WV83 523 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 MRPS27Q92552 414 aaKnown RBP5.34□□□□□ -1.55
CPSF6-206ENST00000550987 TMEM18Q96B42 140 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 CDRT15Q96T59 188 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 WDR83Q9BRX9 315 aaKnown RBP5.34□□□□□ -1.55
CPSF6-206ENST00000550987 DECR2Q9NUI1 292 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 C5AR2Q9P296 337 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 GTF3C4Q9UKN8 822 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 NFE2L3Q9Y4A8 694 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 CREBBPQ92793 2442 aa5.34□□□□□ -1.56
CPSF6-206ENST00000550987 CD163L1Q9NR16 1453 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 TRBV5-3A0A0A0MS03 114 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 TRBC2A0A5B9 178 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 PAPSS1O43252 624 aaPredicted RBP5.33□□□□□ -1.56
CPSF6-206ENST00000550987 ZC3H11AO75152 810 aaKnown RBP eCLIP5.33□□□□□ -1.56
CPSF6-206ENST00000550987 IGLV2-14P01704 120 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 CTSAP10619 480 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 KRT4P19013 534 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 SUOXP51687 545 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 MRPS34P82930 218 aaKnown RBP5.33□□□□□ -1.56
CPSF6-206ENST00000550987 ID2Q02363 134 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 FAM27E3Q08E93 113 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 SCARB2Q14108 478 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 DLG2Q15700 870 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 ZNF628Q5EBL2 1059 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 PIK3CD-AS1Q5SR53 167 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 TMEM198Q66K66 360 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 IQCA1Q86XH1 822 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 MCEMP1Q8IX19 187 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 OR8H3Q8N146 312 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 BADQ92934 168 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 JAKMIP1Q96N16 626 aaKnown RBP5.33□□□□□ -1.56
CPSF6-206ENST00000550987 CLMPQ9H6B4 373 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 TASP1Q9H6P5 420 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 GOLGA2P5Q9HBQ8 144 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 HINT3Q9NQE9 182 aaKnown RBP5.33□□□□□ -1.56
CPSF6-206ENST00000550987 ANAPC2Q9UJX6 822 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 MTCH2Q9Y6C9 303 aa5.33□□□□□ -1.56
CPSF6-206ENST00000550987 NF1P21359 2839 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 A0A1B0GVM2 712 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 TCRBV21S2A2A0A5A6 115 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 LRRC3CA6NJW4 275 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 VCYO14598 125 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 ATP2A1O14983 1001 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 FZD7O75084 574 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 CLDN7O95471 211 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 BCL10O95999 233 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 CHRNB1P11230 501 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 FDPSP14324 419 aaKnown RBP5.32□□□□□ -1.56
CPSF6-206ENST00000550987 ERCC2P18074 760 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 MUTP22033 750 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 MYF6P23409 242 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 MPGP29372 298 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 OAS2P29728 719 aaKnown RBP5.32□□□□□ -1.56
CPSF6-206ENST00000550987 BUD31P41223 144 aaPredicted RBP5.32□□□□□ -1.56
CPSF6-206ENST00000550987 PPP3CCP48454 512 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 CSE1LP55060 971 aaKnown RBP5.32□□□□□ -1.56
CPSF6-206ENST00000550987 ELLP55199 621 aaPredicted RBP5.32□□□□□ -1.56
CPSF6-206ENST00000550987 CFHR1Q03591 330 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 PRKCZQ05513 592 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 TNIP1Q15025 636 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 PNLIPRP3Q17RR3 467 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 CRY2Q49AN0 593 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 EPHA10Q5JZY3 1008 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 COLEC12Q5KU26 742 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 STRIP1Q5VSL9 837 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 CST9LP1Q5W188 147 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 GGNBP1Q5YKI7 109 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 TMEM71Q6P5X7 295 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 PQLC2Q6ZP29 291 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 TRILQ7L0X0 811 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms