RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 PGAM1P18669 254 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 OGNP20774 298 aaKnown RBP9.86□□□□□ -0.83
PFDN5-213ENST00000550964 MGAT1P26572 445 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 AK4P27144 223 aaPredicted RBP9.86□□□□□ -0.83
PFDN5-213ENST00000550964 MAPK9P45984 424 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 PPM1FP49593 454 aaPredicted RBP9.86□□□□□ -0.83
PFDN5-213ENST00000550964 ADARP55265 1226 aaKnown RBP9.86□□□□□ -0.83
PFDN5-213ENST00000550964 OLIG2Q13516 323 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 TRA2AQ13595 282 aaKnown RBP eCLIP9.86□□□□□ -0.83
PFDN5-213ENST00000550964 KRT33BQ14525 404 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 TMED2Q15363 201 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 CCDC38Q502W7 563 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 RNASEH2BQ5TBB1 312 aaKnown RBP9.86□□□□□ -0.83
PFDN5-213ENST00000550964 HES3Q5TGS1 186 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 IZUMO3Q5VZ72 239 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 GUSBP11Q6P575 273 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 CRTC3Q6UUV7 619 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 KDM7AQ6ZMT4 941 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 ZNF572Q7Z3I7 529 aaPredicted RBP9.86□□□□□ -0.83
PFDN5-213ENST00000550964 JAMLQ86YT9 394 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 NAGSQ8N159 534 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 CHCHD4Q8N4Q1 142 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 OTUD6BQ8N6M0 293 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 PNPLA1Q8N8W4 532 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 DCBLD1Q8N8Z6 715 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 OR13J1Q8NGT2 312 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 GPR150Q8NGU9 434 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 ASZ1Q8WWH4 475 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 CCDC74AQ96AQ1 378 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 NXPE2Q96DL1 559 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 SERPINB12Q96P63 405 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 KRT12Q99456 494 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 ERP44Q9BS26 406 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 CARD6Q9BX69 1037 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 PHACTR1Q9C0D0 580 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 CCDC68Q9H2F9 335 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 LRRN3Q9H3W5 708 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 EPB41L5Q9HCM4 733 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 TREX1Q9NSU2 369 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 INTS10Q9NVR2 710 aaKnown RBP9.86□□□□□ -0.83
PFDN5-213ENST00000550964 KCNK4Q9NYG8 393 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 SMARCAL1Q9NZC9 954 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 WHRNQ9P202 907 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 CPNE7Q9UBL6 633 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 GNPTGQ9UJJ9 305 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 KCNK6Q9Y257 313 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 KCTD3Q9Y597 815 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 MAD1L1Q9Y6D9 718 aa9.86□□□□□ -0.83
PFDN5-213ENST00000550964 CCDC162PA2VCL2 907 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 LILRA5A6NI73 299 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 OR2AG2A6NM03 316 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 MATN2O00339 956 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 PRMT5O14744 637 aaPredicted RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 EIF3HO15372 352 aaKnown RBP eCLIP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 TOX3O15405 576 aaPredicted RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 HYAL3O43820 417 aaPredicted RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 MTX2O75431 263 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 ESR1P03372 595 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 APOA4P06727 396 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 CELA2BP08218 269 aaPredicted RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 RPS3P23396 243 aaKnown RBP eCLIP9.85□□□□□ -0.834e-9■■■□□ 18.9
PFDN5-213ENST00000550964 FOXN2P32314 431 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 GRIA1P42261 906 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 PTGIRP43119 386 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 MAGEA3P43357 314 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 DRG2P55039 364 aaKnown RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 INSM1Q01101 510 aaPredicted RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 HIF1AQ16665 826 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 LONRF1Q17RB8 773 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 SYTL3Q4VX76 610 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 GLE1Q53GS7 698 aaKnown RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 SPANXN3Q5MJ09 141 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 FAM182AQ5T1J6 154 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 CDCP2Q5VXM1 449 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 WDR74Q6RFH5 385 aaPredicted RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 CCNI2Q6ZMN8 369 aaPredicted RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 SPRED1Q7Z699 444 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 TMEM135Q86UB9 458 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 CAND1Q86VP6 1230 aaKnown RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 PLXDC1Q8IUK5 500 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 ZNF547Q8IVP9 402 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 CNPY4Q8N129 248 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 CEP112Q8N8E3 955 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 CCL4L1Q8NHW4 92 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 SGF29Q96ES7 293 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 STAMBPL1Q96FJ0 436 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 FAM167BQ9BTA0 163 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 B3GNT4Q9C0J1 378 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 ZMYND15Q9H091 742 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 MVB12BQ9H7P6 319 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 ARFGAP3Q9NP61 516 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 PIH1D1Q9NWS0 290 aaKnown RBP9.85□□□□□ -0.83
PFDN5-213ENST00000550964 SYBUQ9NX95 663 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 NSMCE4AQ9NXX6 385 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 DKK4Q9UBT3 224 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 TBC1D29Q9UFV1 150 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 POLG2Q9UHN1 485 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 TMPRSS11EQ9UL52 423 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 DNAJC16Q9Y2G8 782 aa9.85□□□□□ -0.83
PFDN5-213ENST00000550964 RPS6KL1Q9Y6S9 549 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms