RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 DNAJC21Q5F1R6 531 aaKnown RBP13.49□□□□□ -0.25
TROAP-213ENST00000550709 HP1BP3Q5SSJ5 553 aaPredicted RBP13.49□□□□□ -0.25
TROAP-213ENST00000550709 LYPLAL1Q5VWZ2 237 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 CCNI2Q6ZMN8 369 aaPredicted RBP13.49□□□□□ -0.25
TROAP-213ENST00000550709 USP53Q70EK8 1073 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 MAATS1Q7Z4T9 603 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 SPRED1Q7Z699 444 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 SLC9B2Q86UD5 537 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 HOOK3Q86VS8 718 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 TRIM48Q8IWZ4 208 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 LILRA3Q8N6C8 439 aaPredicted RBP13.49□□□□□ -0.25
TROAP-213ENST00000550709 OR2L2Q8NH16 312 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 STAMBPL1Q96FJ0 436 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 SNF8Q96H20 258 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 SIGLEC10Q96LC7 697 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 FCRL3Q96P31 734 aaPredicted RBP13.49□□□□□ -0.25
TROAP-213ENST00000550709 SLC38A3Q99624 504 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 CCM2Q9BSQ5 444 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 LRRN3Q9H3W5 708 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 CPNE7Q9UBL6 633 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 ATXN7L1Q9ULK2 861 aaPredicted RBP13.49□□□□□ -0.25
TROAP-213ENST00000550709 NEUROG3Q9Y4Z2 214 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 RPS6KL1Q9Y6S9 549 aa13.49□□□□□ -0.25
TROAP-213ENST00000550709 COL5A1P20908 1838 aaPredicted RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 KIR2DS5A0A0G2JLQ3 304 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 PRAMEF33A0A0G2JMD5 474 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 A0A0G2JNG1 304 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 FAM237BA0A1B0GVD1 139 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 A0A1W2PQM1 296 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 FAM187AA6NFU0 413 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 PRR19A6NJB7 356 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 KIR2DS3K7RE56 304 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 KIF2AO00139 706 aaPredicted RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 AGRPO00253 132 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 KCNJ13O60928 360 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 CSO75390 466 aaKnown RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 NDUFS3O75489 264 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 AP2A2O94973 939 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 SEC31AO94979 1220 aaKnown RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 VIPP01282 170 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 BRAFP15056 766 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 ITGB6P18564 788 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 PAMP19021 973 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 PPARGP37231 505 aaPredicted RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 SLC19A1P41440 591 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 MAPK9P45984 424 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 DHX9Q08211 1270 aaKnown RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 DMPKQ09013 629 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 ITIH4Q14624 930 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 KIR2DS5Q14953 304 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 CLCA4Q14CN2 919 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 BRD3Q15059 726 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 WHAMMP3Q1A5X7 153 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 AARS2Q5JTZ9 985 aaKnown RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 CDCP2Q5VXM1 449 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 NKAIN2Q5VXU1 208 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 HIBCHQ6NVY1 386 aaPredicted RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 NAPRTQ6XQN6 538 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 CERS6Q6ZMG9 384 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 RBM44Q6ZP01 1051 aaKnown RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 CXorf40BQ96DE9 158 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 GFM1Q96RP9 751 aaKnown RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 ERP44Q9BS26 406 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 STN1Q9H668 368 aaKnown RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 KCNK4Q9NYG8 393 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 ZNF624Q9P2J8 865 aaPredicted RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 MSRB2Q9Y3D2 182 aa13.48□□□□□ -0.25
TROAP-213ENST00000550709 CFAP20Q9Y6A4 193 aaKnown RBP13.48□□□□□ -0.25
TROAP-213ENST00000550709 ASXL3Q9C0F0 2248 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 OR5K4A6NMS3 321 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 F7P08709 466 aaPredicted RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 PNLIPP16233 465 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 HALP42357 657 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 FASLGP48023 281 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 PREPP48147 710 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 ARCN1P48444 511 aaKnown RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 TTPAP49638 278 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 UBE2IP63279 158 aaKnown RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 THOC5Q13769 683 aaKnown RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 RPE65Q16518 533 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 AGAP9Q5VTM2 703 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 METRNLQ641Q3 311 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 KIAA0930Q6ICG6 404 aaPredicted RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 MRNIPQ6NTE8 343 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 NEPROQ6NW34 567 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 ABRAXAS1Q6UWZ7 409 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 WASH2PQ6VEQ5 465 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 PACS1Q6VY07 963 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 ZNF572Q7Z3I7 529 aaPredicted RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 ZNF438Q7Z4V0 828 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 SDCCAG8Q86SQ7 713 aaPredicted RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 IGDCC3Q8IVU1 814 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 PDIK1LQ8N165 341 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 DCBLD1Q8N8Z6 715 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 SPDYE1Q8NFV5 336 aaPredicted RBP13.47□□□□□ -0.25
TROAP-213ENST00000550709 KIF18AQ8NI77 898 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 HM13Q8TCT9 377 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 SGSM3Q96HU1 749 aa13.47□□□□□ -0.25
TROAP-213ENST00000550709 LINC00615Q96LM1 132 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms