RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 TEX44Q53QW1 395 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 EOGTQ5NDL2 527 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 EGFLAMQ63HQ2 1017 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 ITPRIPL1Q6GPH6 555 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 C22orf39Q6P5X5 142 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 LINGO4Q6UY18 593 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 FRMD7Q6ZUT3 714 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 SYT13Q7L8C5 426 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 MAATS1Q7Z4T9 603 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CXorf67Q86X51 503 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 THNSL2Q86YJ6 484 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CCDC105Q8IYK2 499 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CHPFQ8IZ52 775 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 SPEM1Q8N4L4 309 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 ALLCQ8N6M5 410 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CEP112Q8N8E3 955 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CDYL2Q8N8U2 506 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CCDC89Q8N998 374 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 FAM71DQ8N9W8 422 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 IL17RCQ8NAC3 791 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 PIK3C3Q8NEB9 887 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 SPATA4Q8NEY3 305 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 ATL2Q8NHH9 583 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 HCAR2Q8TDS4 363 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 C1orf54Q8WWF1 131 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 SORCS1Q8WY21 1168 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 ATG4AQ8WYN0 398 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 MAGOHBQ96A72 148 aaKnown RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 TTC28Q96AY4 2481 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CAPZA3Q96KX2 299 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 TEKT5Q96M29 485 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 GDAP1L1Q96MZ0 367 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 SPATA13Q96N96 652 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 NUDCD1Q96RS6 583 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 MGME1Q9BQP7 344 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CINPQ9BW66 212 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 AP1M1Q9BXS5 423 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CPEB1Q9BZB8 566 aaKnown RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 POLR1EQ9GZS1 481 aaKnown RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 MFSD1Q9H3U5 465 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 RBM22Q9NW64 420 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 NCDNQ9UBB6 729 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 SLCO3A1Q9UIG8 710 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 DNPEPQ9ULA0 475 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 MMP17Q9ULZ9 603 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 ATP8A1Q9Y2Q0 1164 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 STON1Q9Y6Q2 735 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 A0A0C4DFX4 3053 aa5.78□□□□□ -1.48
SCAF11-213ENST00000550629 MUC22E2RYF6 1773 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-213ENST00000550629 CHD5Q8TDI0 1954 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 A0A1W2PQ67 120 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CTAGE15A4D2H0 777 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 TMEM221A6NGB7 291 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ERI2A8K979 691 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 TTC34A8MYJ7 566 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 NPIPB8E9PQR5 432 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 K7ERQ8 282 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 M0R296 226 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SGK1O00141 431 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 NDC80O14777 642 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 KCNN4O15554 427 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SMAD6O43541 496 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SYNCRIPO60506 623 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 RNASEH1O60930 286 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SOCS5O75159 536 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ZNF821O75541 412 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ANXA9O76027 345 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 NEBLO76041 1014 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 PAPSS2O95340 614 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 KLF8O95600 359 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 POP4O95707 220 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 IGSF6O95976 241 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 JCHAINP01591 159 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CTAGE8P0CG41 777 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 BPIP17213 487 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 AOC1P19801 751 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CD72P21854 359 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CA4P22748 312 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 PRKCHP24723 683 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 PTPN3P26045 913 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 RBL1P28749 1068 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 HOXA6P31267 233 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ACTN2P35609 894 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 IL12RB1P42701 662 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 STK19P49842 368 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SUOXP51687 545 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 RPL26P61254 145 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 DR1Q01658 176 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 RAD51Q06609 339 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ZBTB17Q13105 803 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SNX1Q13596 522 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 UBXN2BQ14CS0 331 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CYTH1Q15438 398 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ELAVL1Q15717 326 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 PARP6Q2NL67 630 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 MYLK3Q32MK0 819 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ACCSLQ4AC99 568 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 GLE1Q53GS7 698 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CARD16Q5EG05 197 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 DNTTIP2Q5QJE6 756 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms