RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TUBB3Q13509 450 aa22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 ASB18Q6ZVZ8 466 aa22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 FAM26EQ8N5C1 309 aa22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 ZNF514Q96K75 400 aaPredicted RBP22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 CD180Q99467 661 aa22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 VAT1Q99536 393 aa22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 GPR87Q9BY21 358 aa22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 ZNF106Q9H2Y7 1883 aaKnown RBP22.62■■□□□ 1.21
SMARCD1-209ENST00000550477 UBA6A0AVT1 1052 aaPredicted RBP22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 KLHL33A6NCF5 533 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 AURKAO14965 403 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 POP7O75817 140 aaKnown RBP22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 TNNT1P13805 278 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 PTPN3P26045 913 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 RPS15P62841 145 aaKnown RBP22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 DMPKQ09013 629 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 ASTE1Q2TB18 679 aaPredicted RBP22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 ARMC6Q6NXE6 501 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 GLT6D1Q7Z4J2 308 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 C11orf96Q7Z7L8 435 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 IL26Q9NPH9 171 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 KLHL8Q9P2G9 620 aaPredicted RBP22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 WDR37Q9Y2I8 494 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 SPO11Q9Y5K1 396 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 BSNQ9UPA5 3926 aa22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 UBR5O95071 2799 aaPredicted RBP22.61■■□□□ 1.21
SMARCD1-209ENST00000550477 GLYATL1P3A0A0U1RQE8 302 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 LOC285095A0A1B0GVY8 99 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 SPOPO43791 374 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 WNT3AP56704 352 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 LONRF2Q1L5Z9 754 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 KHDC1Q4VXA5 237 aaKnown RBP22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 TMTC4Q5T4D3 741 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 TMEM220Q6QAJ8 160 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 PID1Q7Z2X4 250 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 ZFPM2Q8WW38 1151 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 THAP4Q8WY91 577 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 P3H4Q92791 437 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 SLC41A2Q96JW4 573 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 DNAJC7Q99615 494 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 SEMA5BQ9P283 1151 aa22.6■■□□□ 1.21
SMARCD1-209ENST00000550477 HLA-DPA1P20036 260 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 MSH3P20585 1137 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 PMS2P54278 862 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 HSD11B2P80365 405 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 XRCC4Q13426 336 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 RPE65Q16518 533 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 DNTTIP2Q5QJE6 756 aaKnown RBP22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 FAM151BQ6UXP7 276 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 APLFQ8IW19 511 aaPredicted RBP22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 SLC25A41Q8N5S1 370 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 BLOC1S5Q8TDH9 187 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 RNF31Q96EP0 1072 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 FSD1LQ9BXM9 530 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 IL17CQ9P0M4 197 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 TLK1Q9UKI8 766 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 TMPRSS11EQ9UL52 423 aa22.59■■□□□ 1.21
SMARCD1-209ENST00000550477 IGHV5-51A0A0C4DH38 117 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 CST8O60676 142 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 PYGMP11217 842 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 GP1BBP13224 206 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 AKT1P31749 480 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 MPP3Q13368 585 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 PRKD1Q15139 912 aaPredicted RBP22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 CHRNA6Q15825 494 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 SIRPB2Q5JXA9 342 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 MFSD7Q6UXD7 560 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 B4GALNT4Q76KP1 1039 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 OOSP2Q86WS3 158 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 EFCAB3Q8N7B9 438 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 RASGEF1AQ8N9B8 481 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 DDHD1Q8NEL9 900 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 OR8K5Q8NH50 307 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 CT55Q8WUE5 264 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 FERMT1Q9BQL6 677 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 FGF21Q9NSA1 209 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 IMP3Q9NV31 184 aaKnown RBP22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 ACSL5Q9ULC5 683 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 PSMD13Q9UNM6 376 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 PLAAQ9Y263 795 aa22.58■■□□□ 1.21
SMARCD1-209ENST00000550477 TLCD2A6NGC4 264 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 OR2AG2A6NM03 316 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 STX7O15400 261 aaKnown RBP22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 UGT1A9O60656 530 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 VPS4BO75351 444 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 KLK3P07288 261 aaPredicted RBP22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 UGT1A6P19224 532 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 NFKB1P19838 968 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 UGT1A1P22309 533 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 UGT1A4P22310 534 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 SEMA5AQ13591 1074 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 FAM182AQ5T1J6 154 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 KAZNQ674X7 775 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 PWWP2BQ6NUJ5 590 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 CARFQ8N187 725 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 MIB2Q96AX9 1013 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 FCRL5Q96RD9 977 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 MAP3K3Q99759 626 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 ACTL8Q9H568 366 aa22.57■■□□□ 1.2
SMARCD1-209ENST00000550477 NHEJ1Q9H9Q4 299 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms