RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 SIDT2Q8NBJ9 832 aaKnown RBP12.6□□□□□ -0.39
PTCH1-218ENST00000548945 SPATA22Q8NHS9 363 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 SLC35G2Q8TBE7 412 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 TEKT5Q96M29 485 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 TTC25Q96NG3 672 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 GPR87Q9BY21 358 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 TWSG1Q9GZX9 223 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 IL26Q9NPH9 171 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 HACD3Q9P035 362 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 RARRES3Q9UL19 164 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 PLAAQ9Y263 795 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 MAN2B2Q9Y2E5 1009 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 SPO11Q9Y5K1 396 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 MYO9AB2RTY4 2548 aa12.6□□□□□ -0.39
PTCH1-218ENST00000548945 TNRC6AQ8NDV7 1962 aaKnown RBP12.6□□□□□ -0.39
PTCH1-218ENST00000548945 SHANK1Q9Y566 2161 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 IGHV5-51A0A0C4DH38 117 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 LOC285095A0A1B0GVY8 99 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 PIPSLA2A3N6 862 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 CDC14CA4D256 554 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 KLHL33A6NCF5 533 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 GOLGA6L19H0YKK7 550 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 MTSS1O43312 755 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 PMPCBO75439 489 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 TPM3P06753 285 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 PTPN3P26045 913 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 SLC1A1P43005 524 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 ACY1Q03154 408 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 TUBB3Q13509 450 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 SEMA5AQ13591 1074 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 PRKD1Q15139 912 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-218ENST00000548945 ODF2Q5BJF6 829 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 NPNTQ6UXI9 565 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 RFX6Q8HWS3 928 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 RHOT2Q8IXI1 618 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 CARFQ8N187 725 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 TTC30BQ8N4P2 665 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 DDHD1Q8NEL9 900 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 OR8K5Q8NH50 307 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 GDAP1Q8TB36 358 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 CT55Q8WUE5 264 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 ZFPM2Q8WW38 1151 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 THAP4Q8WY91 577 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 ELMO2Q96JJ3 720 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 ZNF514Q96K75 400 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-218ENST00000548945 DNAJC7Q99615 494 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 DEF6Q9H4E7 631 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 ACTL8Q9H568 366 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 DDX56Q9NY93 547 aaKnown RBP12.59□□□□□ -0.39
PTCH1-218ENST00000548945 IL17CQ9P0M4 197 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 FAM153AQ9UHL3 310 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 TLK1Q9UKI8 766 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 WDR37Q9Y2I8 494 aa12.59□□□□□ -0.39
PTCH1-218ENST00000548945 TLCD2A6NGC4 264 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 K7EM74 188 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 KRT1P04264 644 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 FOLR1P15328 257 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 SPAM1P38567 509 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 TNNT3P45378 269 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-218ENST00000548945 WNT3AP56704 352 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 ITGA9Q13797 1035 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 TRIM14Q14142 442 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 TFDP2Q14188 446 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 RPE65Q16518 533 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 UGT8Q16880 541 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 PWWP2BQ6NUJ5 590 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 KDELC1Q6UW63 502 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 SYVN1Q86TM6 617 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 RHOT1Q8IXI2 618 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 D2HGDHQ8N465 521 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 RASGEF1AQ8N9B8 481 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 OR8K1Q8NGG5 319 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 TFB1MQ8WVM0 346 aaKnown RBP12.58□□□□□ -0.4
PTCH1-218ENST00000548945 PSMG3-AS1Q96PY0 264 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 BPIFA1Q9NP55 256 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 FGF21Q9NSA1 209 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 SMOXQ9NWM0 555 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 IFNKQ9P0W0 207 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 TRIM10Q9UDY6 481 aa12.58□□□□□ -0.4
PTCH1-218ENST00000548945 DOPEY1Q5JWR5 2465 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 PIKFYVEQ9Y2I7 2098 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 AKR1B10O60218 316 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 POP7O75817 140 aaKnown RBP12.57□□□□□ -0.4
PTCH1-218ENST00000548945 TIAF1O95411 115 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 HLA-DPA1P20036 260 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 NR1D1P20393 614 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 PTPN4P29074 926 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 CD68P34810 354 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-218ENST00000548945 PPP1CAP62136 330 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 RPS15P62841 145 aaKnown RBP12.57□□□□□ -0.4
PTCH1-218ENST00000548945 TUBB4BP68371 445 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 HSD11B2P80365 405 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 PDE1BQ01064 536 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 WASHC5Q12768 1159 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 TUBB2AQ13885 445 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 TCEAL1Q15170 157 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 TAZQ16635 292 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 SIRPB2Q5JXA9 342 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 METRNLQ641Q3 311 aa12.57□□□□□ -0.4
PTCH1-218ENST00000548945 TMEM135Q86UB9 458 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms