RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 FAM169AQ9Y6X4 670 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 KNL1Q8NG31 2342 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 LRRK1Q38SD2 2015 aa17.2■□□□□ 0.34
CD9-211ENST00000546073 TRBV23OR9-2A0A075B6M9 112 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 TMX2-CTNND1H3BSU7 103 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 PRMT5O14744 637 aaPredicted RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 KDM1AO60341 852 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 ADRB1P08588 477 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 ALDH4A1P30038 563 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 GPR3P46089 330 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 RPL21P46778 160 aaKnown RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 PRLHRP49683 370 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 CDKN1CP49918 316 aaPredicted RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 HHEXQ03014 270 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 DHX9Q08211 1270 aaKnown RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 DMPKQ09013 629 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 SPIDRQ14159 915 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 KCTD19Q17RG1 926 aaPredicted RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 KHDC1Q4VXA5 237 aaKnown RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 IYDQ6PHW0 289 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 WASH2PQ6VEQ5 465 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 SLCO6A1Q86UG4 719 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 PALM2Q8IXS6 379 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 RBM12BQ8IXT5 1001 aaKnown RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 Q8N9G6 341 aaPredicted RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 OR10G6Q8NH81 332 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 CCDC74AQ96AQ1 378 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 LINC00615Q96LM1 132 aaPredicted RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 DEPDC7Q96QD5 511 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 CCDC3Q9BQI4 270 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 TSPYL1Q9H0U9 437 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 EPB41L5Q9HCM4 733 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 WASH6PQ9NQA3 447 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 AKAP7Q9P0M2 348 aaPredicted RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 TBC1D29Q9UFV1 150 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 MTRF1LQ9UGC7 380 aaKnown RBP17.19■□□□□ 0.34
CD9-211ENST00000546073 PCDHB1Q9Y5F3 818 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 COLEC10Q9Y6Z7 277 aa17.19■□□□□ 0.34
CD9-211ENST00000546073 IGLV3-16A0A075B6K0 115 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 E5RI56 91 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 NOBOXO60393 691 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 APOA4P06727 396 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 MYF5P13349 255 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 OGNP20774 298 aaKnown RBP17.18■□□□□ 0.34
CD9-211ENST00000546073 RPL10P27635 214 aaKnown RBP17.18■□□□□ 0.34
CD9-211ENST00000546073 CTSCP53634 463 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 PDIA2Q13087 525 aaKnown RBP17.18■□□□□ 0.34
CD9-211ENST00000546073 RPA4Q13156 261 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 HLTFQ14527 1009 aaKnown RBP eCLIP17.18■□□□□ 0.34
CD9-211ENST00000546073 AGAP9Q5VTM2 703 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 TMEM135Q86UB9 458 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 ZNF547Q8IVP9 402 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 PIANPQ8IYJ0 282 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 NAGSQ8N159 534 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 PYROXD1Q8WU10 500 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 ELMO1Q92556 727 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 TMEM159Q96B96 161 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 SIGLEC10Q96LC7 697 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 GFM1Q96RP9 751 aaKnown RBP17.18■□□□□ 0.34
CD9-211ENST00000546073 DPYSL5Q9BPU6 564 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 FOXP3Q9BZS1 431 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 SARS2Q9NP81 518 aaKnown RBP17.18■□□□□ 0.34
CD9-211ENST00000546073 PRDM8Q9NQV8 689 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 FAM114A2Q9NRY5 505 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 KCNK4Q9NYG8 393 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 ANGPTL2Q9UKU9 493 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 CLCA2Q9UQC9 943 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 TMEM131Q92545 1883 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 WDR87Q6ZQQ6 2873 aa17.18■□□□□ 0.34
CD9-211ENST00000546073 LIN7AO14910 233 aaPredicted RBP17.17■□□□□ 0.34
CD9-211ENST00000546073 EIF3HO15372 352 aaKnown RBP eCLIP17.17■□□□□ 0.34
CD9-211ENST00000546073 OPA1O60313 960 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 TCEA3O75764 348 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 IVDP26440 423 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 NDUFS1P28331 727 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 MAGEA3P43357 314 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 DRG2P55039 364 aaKnown RBP17.17■□□□□ 0.34
CD9-211ENST00000546073 PLTPP55058 493 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 MAZP56270 477 aaKnown RBP17.17■□□□□ 0.34
CD9-211ENST00000546073 DUPD1Q68J44 220 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 KLHL35Q6PF15 583 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 ABRAXAS1Q6UWZ7 409 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 RBM44Q6ZP01 1051 aaKnown RBP17.17■□□□□ 0.34
CD9-211ENST00000546073 KCNMB4Q86W47 210 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 SFRP1Q8N474 314 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 CHCHD4Q8N4Q1 142 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 MMGT1Q8N4V1 131 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 CLDN19Q8N6F1 224 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 GPR150Q8NGU9 434 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 SLC37A2Q8TED4 501 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 GRAMD1AQ96CP6 724 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 CFAP36Q96G28 342 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 FAM129AQ9BZQ8 928 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 EPB41L1Q9H4G0 881 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 POT1Q9NUX5 634 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 INTS10Q9NVR2 710 aaKnown RBP17.17■□□□□ 0.34
CD9-211ENST00000546073 CPNE7Q9UBL6 633 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 SLC23A2Q9UGH3 650 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 RNF215Q9Y6U7 377 aa17.17■□□□□ 0.34
CD9-211ENST00000546073 ASCC3Q8N3C0 2202 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms