RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 NSMCE2Q96MF7 247 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 NUSAP1Q9BXS6 441 aaKnown RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 TDRD1Q9BXT4 1180 aaKnown RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 LRRC3Q9BY71 257 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 CARS2Q9HA77 564 aaKnown RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 OLA1Q9NTK5 396 aaKnown RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 DNAAF2Q9NVR5 837 aaKnown RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 IFT80Q9P2H3 777 aaPredicted RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 UTS2RQ9UKP6 389 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 POLR3HQ9Y535 204 aaPredicted RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 MTMR11A4FU01 709 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 GUCA1CO95843 209 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 LPOP22079 712 aaPredicted RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 SHMT2P34897 504 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 ADARB1P78563 741 aaKnown RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 MBTPS1Q14703 1052 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 NR6A1Q15406 480 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 ALG1LQ6GMV1 187 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 HS3ST5Q8IZT8 346 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 TSPEARQ8WU66 669 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 ISG20Q96AZ6 181 aaKnown RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 THAP11Q96EK4 314 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 CD320Q9NPF0 282 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 GKN1Q9NS71 199 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 AGO1Q9UL18 857 aaKnown RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 PCDHGA11Q9Y5H2 935 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 COMMD10Q9Y6G5 202 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 UPK1AO00322 258 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 ACSL4O60488 711 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 SNAP91O60641 907 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 ENO2P09104 434 aaPredicted RBP15.59■□□□□ 0.09
LDLR-204ENST00000545707 HTR1EP28566 365 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 LAPTM5Q13571 262 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 BTG3Q14201 252 aaPredicted RBP15.59■□□□□ 0.09
LDLR-204ENST00000545707 ABRAXAS2Q15018 415 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 AASDHQ4L235 1098 aaPredicted RBP15.59■□□□□ 0.09
LDLR-204ENST00000545707 STK32CQ86UX6 486 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 BBS5Q8N3I7 341 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 BPIFB1Q8TDL5 484 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 TMBIM1Q969X1 311 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 C1QTNF3Q9BXJ4 246 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 RIC8BQ9NVN3 520 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 ZIM2Q9NZV7 527 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 RIMKLBQ9ULI2 386 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 GREB1Q4ZG55 1949 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 ANKRD66B4E2M5 251 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 H3BNC9 293 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 STX7O15400 261 aaKnown RBP15.59■□□□□ 0.09
LDLR-204ENST00000545707 DFNA5O60443 496 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 CR2P20023 1033 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 MATN1P21941 496 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 PAX3P23760 479 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 CCND3P30281 292 aaPredicted RBP15.59■□□□□ 0.09
LDLR-204ENST00000545707 MAGEA11P43364 429 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 BNIP3Q12983 259 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 PTGR1Q14914 329 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 TRIM71Q2Q1W2 868 aaKnown RBP15.59■□□□□ 0.09
LDLR-204ENST00000545707 TXNDC11Q6PKC3 985 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 CYP20A1Q6UW02 462 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 USP51Q70EK9 711 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 SLC24A5Q71RS6 500 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 RIMKLAQ8IXN7 391 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 FAM126BQ8IXS8 530 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 OR4F6Q8NGB9 312 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 MIPOL1Q8TD10 442 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 FIG4Q92562 907 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 BDH2Q9BUT1 245 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 NACA2Q9H009 215 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 PAIP1Q9H074 479 aaKnown RBP15.59■□□□□ 0.09
LDLR-204ENST00000545707 MAGEH1Q9H213 219 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 PKD2L2Q9NZM6 624 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 LAMA3Q16787 3333 aa15.59■□□□□ 0.09
LDLR-204ENST00000545707 ALBP02768 609 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 UMPSP11172 480 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 CA5AP35218 305 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 GDF5P43026 501 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 RING1Q06587 406 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 TRAF2Q12933 501 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 GRIK2Q13002 908 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 CRHR2Q13324 411 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 AP5B1Q2VPB7 878 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 DHRS4L2Q6PKH6 230 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 DNAJC14Q6Y2X3 702 aaPredicted RBP15.58■□□□□ 0.09
LDLR-204ENST00000545707 CLEC4FQ8N1N0 589 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 FBXO30Q8TB52 745 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 FNDC8Q8TC99 324 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 OSCP1Q8WVF1 389 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 CGREF1Q99674 301 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 SMURF2Q9HAU4 748 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 CIDEBQ9UHD4 219 aa15.58■□□□□ 0.09
LDLR-204ENST00000545707 OR7A17O14581 309 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 FFAR3O14843 346 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 GPR42O15529 346 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 KLKB1P03952 638 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 CTPS1P17812 591 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 TTPAP49638 278 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 ARSFP54793 590 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 NKG7Q16617 165 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 ENPP6Q6UWR7 440 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 TAS1R1Q7RTX1 841 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms