RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 ZNHIT6Q9NWK9 470 aaKnown RBP8.32□□□□□ -1.08
USP28-215ENST00000545608 WDR37Q9Y2I8 494 aa8.32□□□□□ -1.08
USP28-215ENST00000545608 MRPS18BQ9Y676 258 aaKnown RBP8.32□□□□□ -1.08
USP28-215ENST00000545608 TLN1Q9Y490 2541 aaKnown RBP8.32□□□□□ -1.08
USP28-215ENST00000545608 MYO18BQ8IUG5 2567 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 A0A0A6YYK5 440 aaPredicted RBP8.31□□□□□ -1.08
USP28-215ENST00000545608 LOC285095A0A1B0GVY8 99 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 ANKRD33BA6NCL7 494 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 F5H423 210 aaPredicted RBP8.31□□□□□ -1.08
USP28-215ENST00000545608 UGT1A9O60656 530 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 LILRA1O75019 489 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 TPM3P06753 285 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 PECAM1P16284 738 aaPredicted RBP8.31□□□□□ -1.08
USP28-215ENST00000545608 UGT1A6P19224 532 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 NFKB1P19838 968 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 TCN2P20062 427 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 COMTP21964 271 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 IDSP22304 550 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 UGT1A1P22309 533 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 UGT1A4P22310 534 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 MAPK1P28482 360 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 STAT5AP42229 794 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 CDKN2BP42772 138 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 SLC1A1P43005 524 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 CHRNA4P43681 627 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 WNT3AP56704 352 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 ADCY2Q08462 1091 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 TMEM115Q12893 351 aaPredicted RBP8.31□□□□□ -1.08
USP28-215ENST00000545608 TRIM14Q14142 442 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 MAP7Q14244 749 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 NAA30Q147X3 362 aaPredicted RBP8.31□□□□□ -1.08
USP28-215ENST00000545608 PRKD1Q15139 912 aaPredicted RBP8.31□□□□□ -1.08
USP28-215ENST00000545608 TCEAL1Q15170 157 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 TAZQ16635 292 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 DEFB109BQ30KR1 87 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 AGAP9Q5VTM2 703 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 CCDC70Q6NSX1 233 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 WASH2PQ6VEQ5 465 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 VSTM4Q8IW00 320 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 RHOT2Q8IXI1 618 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 RHOT1Q8IXI2 618 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 TTC30BQ8N4P2 665 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 SLC25A41Q8N5S1 370 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 ESX1Q8N693 406 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 TFB1MQ8WVM0 346 aaKnown RBP8.31□□□□□ -1.08
USP28-215ENST00000545608 STARD8Q92502 1023 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 ELMO2Q96JJ3 720 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 CCDC42Q96M95 316 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 VPS35Q96QK1 796 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 OR6C1Q96RD1 312 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 UGT1A7Q9HAW7 530 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 UGT1A10Q9HAW8 530 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 UGT1A8Q9HAW9 530 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 SLC40A1Q9NP59 571 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 IL26Q9NPH9 171 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 WASH6PQ9NQA3 447 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 ZNF71Q9NQZ8 489 aaPredicted RBP8.31□□□□□ -1.08
USP28-215ENST00000545608 ABHD10Q9NUJ1 306 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 POT1Q9NUX5 634 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 DDX56Q9NY93 547 aaKnown RBP8.31□□□□□ -1.08
USP28-215ENST00000545608 FAM153AQ9UHL3 310 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 TUBD1Q9UJT1 453 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 DCTN4Q9UJW0 460 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 RPS6KL1Q9Y6S9 549 aa8.31□□□□□ -1.08
USP28-215ENST00000545608 ASH1LQ9NR48 2969 aaKnown RBP8.3□□□□□ -1.08
USP28-215ENST00000545608 TOX3O15405 576 aaPredicted RBP8.3□□□□□ -1.08
USP28-215ENST00000545608 GPR39O43194 453 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 CBFA2T2O43439 604 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 BUD23O43709 281 aaKnown RBP8.3□□□□□ -1.08
USP28-215ENST00000545608 CST8O60676 142 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 MFAP3LO75121 409 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 SPAG6O75602 509 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 POP7O75817 140 aaKnown RBP8.3□□□□□ -1.08
USP28-215ENST00000545608 RASSF9O75901 435 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 KIAA0754O94854 1291 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 HMGCLP35914 325 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 NR2C2P49116 596 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 CTSCP53634 463 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 PPP1CAP62136 330 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 MC1RQ01726 317 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 TFDP2Q14188 446 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 GPR18Q14330 331 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 PTPRCAPQ14761 206 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 CHRNA6Q15825 494 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 ODF2Q5BJF6 829 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 SIRPB2Q5JXA9 342 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 COLEC12Q5KU26 742 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 CACHD1Q5VU97 1274 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 KAZNQ674X7 775 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 C6orf15Q6UXA7 325 aaPredicted RBP8.3□□□□□ -1.08
USP28-215ENST00000545608 SPOCD1Q6ZMY3 1216 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 FAM92BQ6ZTR7 304 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 BZW1Q7L1Q6 419 aaKnown RBP8.3□□□□□ -1.08
USP28-215ENST00000545608 PID1Q7Z2X4 250 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 TRAPPC5Q8IUR0 188 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 ZNF567Q8N184 647 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 RASGEF1AQ8N9B8 481 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 GALNT6Q8NCL4 622 aa8.3□□□□□ -1.08
USP28-215ENST00000545608 C9orf43Q8TAL5 461 aaPredicted RBP8.3□□□□□ -1.08
USP28-215ENST00000545608 GDAP1Q8TB36 358 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms