RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 MSLNQ13421 630 aaPredicted RBP20.73■□□□□ 0.91
SCARB1-210ENST00000545493 XKR5Q6UX68 686 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 RANBP10Q6VN20 620 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 ZNF605Q86T29 641 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 GAS2L3Q86XJ1 694 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 PLXDC1Q8IUK5 500 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 CACNA2D3Q8IZS8 1091 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 IL22RA1Q8N6P7 574 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 CCDC110Q8TBZ0 833 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 NAT14Q8WUY8 206 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 SPATA13Q96N96 652 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 TGM7Q96PF1 710 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 SLC12A9Q9BXP2 914 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 SLC40A1Q9NP59 571 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 FBXO8Q9NRD0 319 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.73■□□□□ 0.917e-8■□□□□ 10.9
SCARB1-210ENST00000545493 FKBPLQ9UIM3 349 aa20.73■□□□□ 0.91
SCARB1-210ENST00000545493 STX7O15400 261 aaKnown RBP20.72■□□□□ 0.91
SCARB1-210ENST00000545493 CAPN5O15484 640 aaPredicted RBP20.72■□□□□ 0.91
SCARB1-210ENST00000545493 NFE2L1Q14494 772 aa20.72■□□□□ 0.91
SCARB1-210ENST00000545493 AMZ2Q86W34 360 aa20.72■□□□□ 0.91
SCARB1-210ENST00000545493 RBM12BQ8IXT5 1001 aaKnown RBP20.72■□□□□ 0.91
SCARB1-210ENST00000545493 KLHDC8BQ8IXV7 354 aa20.72■□□□□ 0.91
SCARB1-210ENST00000545493 ZSCAN1Q8NBB4 408 aa20.72■□□□□ 0.91
SCARB1-210ENST00000545493 OR4K2Q8NGD2 314 aa20.72■□□□□ 0.91
SCARB1-210ENST00000545493 CXorf40BQ96DE9 158 aa20.72■□□□□ 0.91
SCARB1-210ENST00000545493 TTC25Q96NG3 672 aa20.72■□□□□ 0.91
SCARB1-210ENST00000545493 KCTD3Q9Y597 815 aa20.72■□□□□ 0.91
SCARB1-210ENST00000545493 POP7O75817 140 aaKnown RBP20.71■□□□□ 0.91
SCARB1-210ENST00000545493 DLGAP3O95886 979 aa20.71■□□□□ 0.91
SCARB1-210ENST00000545493 PBLDP30039 288 aaPredicted RBP20.71■□□□□ 0.91
SCARB1-210ENST00000545493 PPP1CAP62136 330 aa20.71■□□□□ 0.91
SCARB1-210ENST00000545493 TAF1AQ15573 450 aaPredicted RBP20.71■□□□□ 0.91
SCARB1-210ENST00000545493 TBR1Q16650 682 aa20.71■□□□□ 0.91
SCARB1-210ENST00000545493 DARS2Q6PI48 645 aaKnown RBP20.71■□□□□ 0.91
SCARB1-210ENST00000545493 TMEM220Q6QAJ8 160 aa20.71■□□□□ 0.91
SCARB1-210ENST00000545493 TIPARPQ7Z3E1 657 aaKnown RBP20.71■□□□□ 0.91
SCARB1-210ENST00000545493 PRSS42Q7Z5A4 293 aa20.71■□□□□ 0.91
SCARB1-210ENST00000545493 BEND7Q8N7W2 519 aaPredicted RBP20.71■□□□□ 0.91
SCARB1-210ENST00000545493 OR13C4Q8NGS5 318 aa20.71■□□□□ 0.91
SCARB1-210ENST00000545493 ZPBPQ9BS86 351 aa20.71■□□□□ 0.91
SCARB1-210ENST00000545493 ZNF768Q9H5H4 540 aaKnown RBP20.71■□□□□ 0.91
SCARB1-210ENST00000545493 PACSIN2Q9UNF0 486 aaPredicted RBP20.71■□□□□ 0.91
SCARB1-210ENST00000545493 AAR2Q9Y312 384 aaKnown RBP20.71■□□□□ 0.91
SCARB1-210ENST00000545493 TMEM184BQ9Y519 407 aaPredicted RBP20.71■□□□□ 0.91
SCARB1-210ENST00000545493 B8ZZF3 427 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 KIF1CO43896 1103 aaKnown RBP20.7■□□□□ 0.9
SCARB1-210ENST00000545493 KCNJ13O60928 360 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 STK17BO94768 372 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 FAM87AP0C7U9 286 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 AMD1P17707 334 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 LPOP22079 712 aaPredicted RBP20.7■□□□□ 0.9
SCARB1-210ENST00000545493 AKT1P31749 480 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 HALP42357 657 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 SEPHS1P49903 392 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 ZNF140P52738 457 aaPredicted RBP20.7■□□□□ 0.9
SCARB1-210ENST00000545493 SH3BP2P78314 561 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 XIAPP98170 497 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 RPE65Q16518 533 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 DENND5AQ6IQ26 1287 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 MICALCLQ6ZW33 695 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 DET1Q7L5Y6 550 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 NLGN4XQ8N0W4 816 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 NLGN4YQ8NFZ3 816 aaPredicted RBP20.7■□□□□ 0.9
SCARB1-210ENST00000545493 ZNF398Q8TD17 642 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 BAG1Q99933 345 aaPredicted RBP20.7■□□□□ 0.9
SCARB1-210ENST00000545493 FERMT1Q9BQL6 677 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 DESI2Q9BSY9 194 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 PSMD13Q9UNM6 376 aa20.7■□□□□ 0.9
SCARB1-210ENST00000545493 LOC101059948A0A1B0GTJ6 334 aa20.69■□□□□ 0.9
SCARB1-210ENST00000545493 POLR1CO15160 346 aaPredicted RBP20.69■□□□□ 0.9
SCARB1-210ENST00000545493 TOX3O15405 576 aaPredicted RBP20.69■□□□□ 0.9
SCARB1-210ENST00000545493 DDX3YO15523 660 aaKnown RBP20.69■□□□□ 0.9
SCARB1-210ENST00000545493 SGTAO43765 313 aa20.69■□□□□ 0.9
SCARB1-210ENST00000545493 SRP72O76094 671 aaKnown RBP20.69■□□□□ 0.9
SCARB1-210ENST00000545493 STK10O94804 968 aaKnown RBP20.69■□□□□ 0.9
SCARB1-210ENST00000545493 TJP3O95049 919 aa20.69■□□□□ 0.9
SCARB1-210ENST00000545493 SPARCL1Q14515 664 aa20.69■□□□□ 0.9
SCARB1-210ENST00000545493 FNBP1LQ5T0N5 605 aa20.69■□□□□ 0.9
SCARB1-210ENST00000545493 DUS1LQ6P1R4 473 aaKnown RBP20.69■□□□□ 0.9
SCARB1-210ENST00000545493 KIAA1328Q86T90 577 aa20.69■□□□□ 0.9
SCARB1-210ENST00000545493 RNF31Q96EP0 1072 aa20.69■□□□□ 0.9
SCARB1-210ENST00000545493 TBL1YQ9BQ87 522 aa20.69■□□□□ 0.9
SCARB1-210ENST00000545493 ASB8Q9H765 288 aa20.69■□□□□ 0.9
SCARB1-210ENST00000545493 TLN1Q9Y490 2541 aaKnown RBP20.69■□□□□ 0.9
SCARB1-210ENST00000545493 C2orf81A6NN90 581 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 ZIC2O95409 532 aaPredicted RBP20.68■□□□□ 0.9
SCARB1-210ENST00000545493 FTCDO95954 541 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 ZNF28P17035 718 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 ITGB6P18564 788 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 MSH3P20585 1137 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 KLF1Q13351 362 aaPredicted RBP20.68■□□□□ 0.9
SCARB1-210ENST00000545493 PRPSAP1Q14558 356 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 LONRF2Q1L5Z9 754 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 BCL7AQ4VC05 210 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 FAM92BQ6ZTR7 304 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 UNC5BQ8IZJ1 945 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 ARHGAP9Q9BRR9 750 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 EPHA6Q9UF33 1036 aa20.68■□□□□ 0.9
SCARB1-210ENST00000545493 AMFRQ9UKV5 643 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms