RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ZFYVE1Q9HBF4 777 aa14.4□□□□□ -0.1
RTN3-214ENST00000545432 ARFGAP3Q9NP61 516 aa14.4□□□□□ -0.1
RTN3-214ENST00000545432 RAD18Q9NS91 495 aa14.4□□□□□ -0.1
RTN3-214ENST00000545432 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.4□□□□□ -0.1
RTN3-214ENST00000545432 LIMA1Q9UHB6 759 aaKnown RBP14.4□□□□□ -0.1
RTN3-214ENST00000545432 SNX7Q9UNH6 387 aa14.4□□□□□ -0.1
RTN3-214ENST00000545432 ZFHX3Q15911 3703 aa14.4□□□□□ -0.1
RTN3-214ENST00000545432 LGALS16A8MUM7 142 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 CDK14O94921 469 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 ZBTB11O95625 1053 aaPredicted RBP14.39□□□□□ -0.11
RTN3-214ENST00000545432 MSL3P1P0C860 447 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 GRNP28799 593 aaKnown RBP14.39□□□□□ -0.11
RTN3-214ENST00000545432 ARSEP51690 589 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 DRG2P55039 364 aaKnown RBP14.39□□□□□ -0.11
RTN3-214ENST00000545432 SEPT7Q16181 437 aaKnown RBP14.39□□□□□ -0.11
RTN3-214ENST00000545432 IFI16Q16666 785 aaKnown RBP14.39□□□□□ -0.11
RTN3-214ENST00000545432 SMTNL2Q2TAL5 461 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 ZNF789Q5FWF6 425 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 CRTC3Q6UUV7 619 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 Q6ZS92 163 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 NIPA2Q8N8Q9 360 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 ST6GALNAC3Q8NDV1 305 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 ZFPM2Q8WW38 1151 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 INPP5DQ92835 1189 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 MOCOSQ96EN8 888 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 VPS35Q96QK1 796 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 MAGEE1Q9HCI5 957 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 DNAJC16Q9Y2G8 782 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 SCINQ9Y6U3 715 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 SPTBP11277 2137 aa14.39□□□□□ -0.11
RTN3-214ENST00000545432 PCSK5Q92824 1860 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 OR5K3A6NET4 321 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 FTLP02792 175 aaPredicted RBP14.38□□□□□ -0.11
RTN3-214ENST00000545432 HLA-DQB2P05538 268 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 TPM2P07951 284 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 SLC25A11Q02978 314 aaKnown RBP14.38□□□□□ -0.11
RTN3-214ENST00000545432 RPE65Q16518 533 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 FAM198BQ6UWH4 519 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 APTXQ7Z2E3 356 aaKnown RBP14.38□□□□□ -0.11
RTN3-214ENST00000545432 TMEM126BQ8IUX1 230 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 GPR150Q8NGU9 434 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 CPT1BQ92523 772 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 HSPH1Q92598 858 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 MARVELD3Q96A59 401 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 IP6K3Q96PC2 410 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 ZNF552Q9H707 407 aaPredicted RBP14.38□□□□□ -0.11
RTN3-214ENST00000545432 SYTL2Q9HCH5 934 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 PCMTD2Q9NV79 361 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 HAUS2Q9NVX0 235 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 NTNG1Q9Y2I2 539 aa14.38□□□□□ -0.11
RTN3-214ENST00000545432 DNMT3AQ9Y6K1 912 aaPredicted RBP14.38□□□□□ -0.11
RTN3-214ENST00000545432 TMCO5BA8MYB1 307 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 MFSD11O43934 449 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 KLHL41O60662 606 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 ITGA3P26006 1051 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 HADHAP40939 763 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 TMEM115Q12893 351 aaPredicted RBP14.37□□□□□ -0.11
RTN3-214ENST00000545432 ABRQ12979 859 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 ATP1A4Q13733 1029 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 PIGHQ14442 188 aaPredicted RBP14.37□□□□□ -0.11
RTN3-214ENST00000545432 PLCL1Q15111 1095 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 ZRSR2Q15696 482 aaKnown RBP14.37□□□□□ -0.11
RTN3-214ENST00000545432 GPR19Q15760 415 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 PLA2G4EQ3MJ16 856 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 DNTTIP2Q5QJE6 756 aaKnown RBP14.37□□□□□ -0.11
RTN3-214ENST00000545432 CCDC183Q5T5S1 534 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 PRAMEF17Q5VTA0 474 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 ZNF385CQ66K41 422 aaPredicted RBP14.37□□□□□ -0.11
RTN3-214ENST00000545432 NCBP2-AS2Q69YL0 99 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 SP5Q6BEB4 398 aaPredicted RBP14.37□□□□□ -0.11
RTN3-214ENST00000545432 CNTD1Q8N815 330 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 UBE2Q2Q8WVN8 375 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 TADA1Q96BN2 335 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 ADGRE3Q9BY15 652 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 ISCUQ9H1K1 167 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 MRPL47Q9HD33 250 aaKnown RBP14.37□□□□□ -0.11
RTN3-214ENST00000545432 FANCLQ9NW38 375 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 PCDHGA10Q9Y5H3 936 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 COPG1Q9Y678 874 aaKnown RBP14.37□□□□□ -0.11
RTN3-214ENST00000545432 PDZD2O15018 2839 aa14.37□□□□□ -0.11
RTN3-214ENST00000545432 UBA6A0AVT1 1052 aaPredicted RBP14.36□□□□□ -0.11
RTN3-214ENST00000545432 HEATR9A2RTY3 570 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 A6NL46 340 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 DDX3XO00571 662 aaKnown RBP eCLIP14.36□□□□□ -0.116e-22■■■□□ 17.7
RTN3-214ENST00000545432 MTX2O75431 263 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 KLF7O75840 302 aaPredicted RBP14.36□□□□□ -0.11
RTN3-214ENST00000545432 MYBL1P10243 752 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 BPIP17213 487 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 VCLP18206 1134 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 HALP42357 657 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 BECN1Q14457 450 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 MYBPC3Q14896 1274 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 KRTAP21-3Q3LHN1 58 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 FAM69BQ5VUD6 431 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 ZNF571Q7Z3V5 609 aaPredicted RBP14.36□□□□□ -0.11
RTN3-214ENST00000545432 KCNMB4Q86W47 210 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 BRSK1Q8TDC3 778 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 SGSM3Q96HU1 749 aa14.36□□□□□ -0.11
RTN3-214ENST00000545432 DPH2Q9BQC3 489 aaPredicted RBP14.36□□□□□ -0.11
RTN3-214ENST00000545432 DHRS4Q9BTZ2 278 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms