RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ACSBG2Q5FVE4 666 aa29.98■■■□□ 2.39
CCM2-219ENST00000544363 TRIM74Q86UV6 250 aa29.98■■■□□ 2.39
CCM2-219ENST00000544363 TP53I13Q8NBR0 393 aaPredicted RBP29.98■■■□□ 2.39
CCM2-219ENST00000544363 KLK6Q92876 244 aa29.98■■■□□ 2.39
CCM2-219ENST00000544363 CCDC126Q96EE4 140 aa29.98■■■□□ 2.39
CCM2-219ENST00000544363 ATOH8Q96SQ7 321 aa29.98■■■□□ 2.39
CCM2-219ENST00000544363 FOXQ1Q9C009 403 aa29.98■■■□□ 2.39
CCM2-219ENST00000544363 EPHX3Q9H6B9 360 aa29.98■■■□□ 2.39
CCM2-219ENST00000544363 ITM2CQ9NQX7 267 aa29.98■■■□□ 2.39
CCM2-219ENST00000544363 OR2AG2A6NM03 316 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 CDC7O00311 574 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 BTN3A1O00481 513 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 KERAO60938 352 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 CBSLP0DN79 551 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 TEAD1P28347 426 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 CBSP35520 551 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 CTSCP53634 463 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 GAS6Q14393 721 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 TSNQ15631 228 aaKnown RBP29.97■■■□□ 2.39
CCM2-219ENST00000544363 NAPRTQ6XQN6 538 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 TRIM67Q6ZTA4 783 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 ADGRG6Q86SQ4 1221 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 GRAMD1AQ96CP6 724 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 COX14Q96I36 57 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 ELAC2Q9BQ52 826 aaKnown RBP29.97■■■□□ 2.39
CCM2-219ENST00000544363 MBNL1Q9NR56 388 aaKnown RBP29.97■■■□□ 2.39
CCM2-219ENST00000544363 THAP1Q9NVV9 213 aa29.97■■■□□ 2.39
CCM2-219ENST00000544363 NPEPPSL1A6NEC2 478 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 KPNA5O15131 536 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 CDK14O94921 469 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 PRLHRP49683 370 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 ASPHQ12797 758 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 NUMA1Q14980 2115 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 IRF4Q15306 451 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 TMEM220Q6QAJ8 160 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 PIGWQ7Z7B1 504 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 PGBD3Q8N328 593 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 C7orf26Q96N11 449 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 GATA5Q9BWX5 397 aaPredicted RBP29.96■■■□□ 2.39
CCM2-219ENST00000544363 C1QTNF7Q9BXJ2 289 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 USP36Q9P275 1121 aaKnown RBP29.96■■■□□ 2.39
CCM2-219ENST00000544363 EBF1Q9UH73 591 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 RNF112Q9ULX5 631 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 NEMP2A6NFY4 417 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 A8MT66 165 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 DNAJB13P59910 316 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 OCRLQ01968 901 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 CGB2Q6NT52 195 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 PIWIL4Q7Z3Z4 852 aaKnown RBP29.96■■■□□ 2.39
CCM2-219ENST00000544363 HEATR4Q86WZ0 1026 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 SLC22A9Q8IVM8 553 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 MYO1HQ8N1T3 1032 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 BEND7Q8N7W2 519 aaPredicted RBP29.96■■■□□ 2.39
CCM2-219ENST00000544363 BTBD1Q9H0C5 482 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 OR2AG1Q9H205 316 aa29.96■■■□□ 2.39
CCM2-219ENST00000544363 EIF3FO00303 357 aaPredicted RBP29.95■■■□□ 2.38
CCM2-219ENST00000544363 VEGFDO43915 354 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 SMIM24O75264 130 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 IPO13O94829 963 aaKnown RBP29.95■■■□□ 2.38
CCM2-219ENST00000544363 TPBGLP0DKB5 382 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 ACSL1P33121 698 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 SLC1A6P48664 564 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 CDK3Q00526 305 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 GBX1Q14549 363 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 PLEKHS1Q5SXH7 462 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 ASB12Q8WXK4 309 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 FUBP1Q96AE4 644 aaKnown RBP29.95■■■□□ 2.38
CCM2-219ENST00000544363 SGK2Q9HBY8 427 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 C2orf42Q9NWW7 574 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 ATXN10Q9UBB4 475 aa29.95■■■□□ 2.38
CCM2-219ENST00000544363 ENO3P13929 434 aaPredicted RBP29.94■■■□□ 2.38
CCM2-219ENST00000544363 PPP2CBP62714 309 aa29.94■■■□□ 2.38
CCM2-219ENST00000544363 PPP2CAP67775 309 aa29.94■■■□□ 2.38
CCM2-219ENST00000544363 GTF2H3Q13889 308 aa29.94■■■□□ 2.38
CCM2-219ENST00000544363 INPP5AQ14642 412 aa29.94■■■□□ 2.38
CCM2-219ENST00000544363 BCL7AQ4VC05 210 aa29.94■■■□□ 2.38
CCM2-219ENST00000544363 GKAP1Q5VSY0 366 aaPredicted RBP29.94■■■□□ 2.38
CCM2-219ENST00000544363 OR2T34Q8NGX1 318 aa29.94■■■□□ 2.38
CCM2-219ENST00000544363 ELMO1Q92556 727 aa29.94■■■□□ 2.38
CCM2-219ENST00000544363 TEX101Q9BY14 249 aa29.94■■■□□ 2.38
CCM2-219ENST00000544363 C20orf27Q9GZN8 174 aa29.94■■■□□ 2.38
CCM2-219ENST00000544363 ZNF395Q9H8N7 513 aaPredicted RBP29.94■■■□□ 2.38
CCM2-219ENST00000544363 SYCE1LA8MT33 242 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 TMEM114B3SHH9 223 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 ITM2AO43736 263 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 SNX3O60493 162 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 MTHFD2P13995 350 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 MAT2AP31153 395 aaKnown RBP29.93■■■□□ 2.38
CCM2-219ENST00000544363 TRIM23P36406 574 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 ABCE1P61221 599 aaKnown RBP29.93■■■□□ 2.38
CCM2-219ENST00000544363 NFKB2Q00653 900 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 CYHR1Q6ZMK1 362 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 EXT2Q93063 718 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 CCM2Q9BSQ5 444 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 TBC1D17Q9HA65 648 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 TSR3Q9UJK0 312 aaKnown RBP29.93■■■□□ 2.38
CCM2-219ENST00000544363 DOCK9Q9BZ29 2069 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 LRRC72A6NJI9 287 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 UBXN8O00124 270 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 IGLV3-19P01714 112 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms