RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TIMM29Q9BSF4 260 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 TSSK1BQ9BXA7 367 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CCDC68Q9H2F9 335 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SLC17A6Q9P2U8 582 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PCDHGB2Q9Y5G2 931 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 DNMT3AQ9Y6K1 912 aaPredicted RBP14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CSNK1G3Q9Y6M4 447 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 LAMA1P25391 3075 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 YY2O15391 372 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 TRIM16O95361 564 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ALPPL2P10696 532 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 RPS3P23396 243 aaKnown RBP eCLIP14.25□□□□□ -0.133e-7■■■□□ 17.4
TNFRSF1A-216ENST00000543995 PMS2P54278 862 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 INAVAQ3KP66 663 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ZNF789Q5FWF6 425 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 WDR93Q6P2C0 686 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 KIAA0408Q6ZU52 694 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 C11orf96Q7Z7L8 435 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ALYREFQ86V81 257 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CTAGE3PQ8IX95 158 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 EID2Q8N6I1 236 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 FAM46DQ8NEK8 389 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CCM2Q9BSQ5 444 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PARD6BQ9BYG5 372 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 P2RY12Q9H244 342 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 DPEP2Q9H4A9 486 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 TXNDC16Q9P2K2 825 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SLC23A2Q9UGH3 650 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PCDHB1Q9Y5F3 818 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ST14Q9Y5Y6 855 aa14.25□□□□□ -0.13
TNFRSF1A-216ENST00000543995 MGAT4DA6NG13 374 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 LMO7DNF2Z398 122 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 FLRT2O43155 660 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SNX2O60749 519 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PIAS1O75925 651 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 HAUS5O94927 633 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ESR1P03372 595 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ITGB6P18564 788 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 GRK6P43250 576 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 LEPRP48357 1165 aaKnown RBP14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 NAA30Q147X3 362 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ZNF449Q6P9G9 518 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CNSTQ6PJW8 725 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CYS1Q717R9 158 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 TRMT10CQ7L0Y3 403 aaKnown RBP14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 KANSL1Q7Z3B3 1105 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 NRROSQ86YC3 692 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 OR2L2Q8NH16 312 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ELMO1Q92556 727 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 LINC00615Q96LM1 132 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PANX3Q96QZ0 392 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 DUSP23Q9BVJ7 150 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 NSMCE4AQ9NXX6 385 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 NLGN3Q9NZ94 848 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 TAAR2Q9P1P5 351 aa14.24□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CABIN1Q9Y6J0 2220 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 FRYLO94915 3013 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 FAM159BA6NKW6 160 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 IQCF5A8MTL0 148 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 E5RI56 91 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 H3BMM5 538 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 KCNJ13O60928 360 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 AHSGP02765 367 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CD59P13987 128 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PKMP14618 531 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 IDSP22304 550 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 LIMK1P53667 647 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ADARP55265 1226 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 ARHGAP8P85298 464 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 NFE2L1Q14494 772 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SEPT7Q16181 437 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 KBTBD12Q3ZCT8 623 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CTSL3PQ5NE16 218 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 UBAP2Q5T6F2 1119 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 LVRNQ6Q4G3 990 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 STRA8Q7Z7C7 330 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SLC26A11Q86WA9 606 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 NAXDQ8IW45 347 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CFAP206Q8IYR0 622 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 KRT222Q8N1A0 295 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PPM1NQ8N819 430 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 NETO1Q8TDF5 533 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 BIRC8Q96P09 236 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SMYD2Q9NRG4 433 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SIRPGQ9P1W8 387 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 PSAT1Q9Y617 370 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 DNAH14Q0VDD8 3507 aa14.23□□□□□ -0.13
TNFRSF1A-216ENST00000543995 A0A087WUV0 522 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 KLHL33A6NCF5 533 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CXorf49A8MYA2 514 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 B4DGG1 531 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 TPP1O14773 563 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 TUBBP07437 444 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 GSTM1P09488 218 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CHRM3P20309 590 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 CD151P48509 253 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 GSTM4Q03013 218 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 BOP1Q14137 746 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 BRD3Q15059 726 aa14.22□□□□□ -0.13
TNFRSF1A-216ENST00000543995 SYTL3Q4VX76 610 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms