RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	GMEB2	Q9UKD1	530 aa		11.72	□□□□□ -0.53
DDB1-223	ENST00000543658	PILRB	Q9UKJ0	227 aa		11.72	□□□□□ -0.53
DDB1-223	ENST00000543658	SUFU	Q9UMX1	484 aa		11.72	□□□□□ -0.53
DDB1-223	ENST00000543658	SMG5	Q9UPR3	1016 aa	Known RBP	11.72	□□□□□ -0.53
DDB1-223	ENST00000543658	SLC17A4	Q9Y2C5	497 aa		11.72	□□□□□ -0.53
DDB1-223	ENST00000543658	MTO1	Q9Y2Z2	717 aa	Known RBP	11.72	□□□□□ -0.53
DDB1-223	ENST00000543658	VWA7	Q9Y334	891 aa		11.72	□□□□□ -0.53
DDB1-223	ENST00000543658	PRSS21	Q9Y6M0	314 aa		11.72	□□□□□ -0.53
DDB1-223	ENST00000543658	SDK1	Q7Z5N4	2213 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	CHUK	O15111	745 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	NIPSNAP2	O75323	286 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	EPN2	O95208	641 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	MT-ND3	P03897	115 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	WNT1	P04628	370 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	CEACAM5	P06731	702 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	GABRB3	P28472	473 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	GCA	P28676	217 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	TYK2	P29597	1187 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	SKIV2L2	P42285	1042 aa	Known RBP	11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	RGS4	P49798	205 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	CTSC	P53634	463 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	NXPH1	P58417	271 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	DNAJC3	Q13217	504 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	RASA2	Q15283	850 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	LAIR1	Q6GTX8	287 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	CHST15	Q7LFX5	561 aa	Predicted RBP	11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	PHACTR4	Q8IZ21	702 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	KRT222	Q8N1A0	295 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	SLC22A18AS	Q8N1D0	253 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	BEND7	Q8N7W2	519 aa	Predicted RBP	11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	HM13	Q8TCT9	377 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	NAT14	Q8WUY8	206 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	ATOH1	Q92858	354 aa	Predicted RBP	11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	TSACC	Q96A04	125 aa	Predicted RBP	11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	TMEM159	Q96B96	161 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	FAM136A	Q96C01	138 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	CCDC97	Q96F63	343 aa	Predicted RBP	11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	PDXP	Q96GD0	296 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	CABS1	Q96KC9	395 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	BIRC8	Q96P09	236 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	NUSAP1	Q9BXS6	441 aa	Known RBP	11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	KCNH6	Q9H252	994 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	OSGEPL1	Q9H4B0	414 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	SYTL2	Q9HCH5	934 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	FGF22	Q9HCT0	170 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	MRPL40	Q9NQ50	206 aa	Known RBP	11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	FAM8A1	Q9UBU6	413 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	APOBEC3B	Q9UH17	382 aa	Known RBP	11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	TLK1	Q9UKI8	766 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	PCDHGA5	Q9Y5G8	931 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	NFS1	Q9Y697	457 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	SLCO1B1	Q9Y6L6	691 aa		11.71	□□□□□ -0.53
DDB1-223	ENST00000543658	BPTF	Q12830	3046 aa		11.71	□□□□□ -0.54
DDB1-223	ENST00000543658	MUC3A	Q02505	3323 aa		11.71	□□□□□ -0.54
DDB1-223	ENST00000543658		A0A1B0GVT2	93 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	IQCF5	A8MTL0	148 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	TPP1	O14773	563 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	ATP8B1	O43520	1251 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	KCNJ13	O60928	360 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	SYP	P08247	313 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	ACP5	P13686	325 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	JUND	P17535	347 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	FDXR	P22570	491 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	CRABP2	P29373	138 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	MPL	P40238	635 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	HK3	P52790	923 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	RAB10	P61026	200 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	PLOD1	Q02809	727 aa	Predicted RBP	11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	ILF3	Q12906	894 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	LRP8	Q14114	963 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	FZD2	Q14332	565 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	ALG11	Q2TAA5	492 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	PYCR3	Q53H96	274 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	HSP90B2P	Q58FF3	399 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	LRRC8E	Q6NSJ5	796 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	ZNF549	Q6P9A3	640 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	IL27RA	Q6UWB1	636 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	CCDC91	Q7Z6B0	441 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	AMZ2	Q86W34	360 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	ZBTB2	Q8N680	514 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	PRSS33	Q8NF86	280 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	C1orf216	Q8TAB5	229 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	SKA2	Q8WVK7	121 aa	Predicted RBP	11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	OR1E3	Q8WZA6	343 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	GPR21	Q99679	349 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	TIMM29	Q9BSF4	260 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	GSDMC	Q9BYG8	508 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	VPS11	Q9H270	941 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	CAB39L	Q9H9S4	337 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	POPDC3	Q9HBV1	291 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	GPAM	Q9HCL2	828 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	SNX15	Q9NRS6	342 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	GPR27	Q9NS67	375 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	LGALS13	Q9UHV8	139 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	DOLK	Q9UPQ8	538 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	ANKRD6	Q9Y2G4	727 aa		11.7	□□□□□ -0.54
DDB1-223	ENST00000543658	DNAJC16	Q9Y2G8	782 aa		11.7	□□□□□ -0.54

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