RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 V9GYY5 206 aaPredicted RBP6.22□□□□□ -1.41
LTBR-212ENST00000543542 MUC6Q6W4X9 2439 aa6.22□□□□□ -1.41
LTBR-212ENST00000543542 GON4LQ3T8J9 2241 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 CPED1A4D0V7 1026 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 KLHL33A6NCF5 533 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 MGAT4DA6NG13 374 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 RHPN2P1A8MT19 583 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 H3BMM5 538 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 PRMT5O14744 637 aaPredicted RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 TPP1O14773 563 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 CHUKO15111 745 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 KCNJ13O60928 360 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 SPAG6O75602 509 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 GSTA2P09210 222 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 SLC35G4P0C7Q5 338 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 MYF5P13349 255 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 SAT1P21673 171 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 PSMA3P25788 255 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 RPL10P27635 214 aaKnown RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 SSTR1P30872 391 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 STX2P32856 288 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 SLC1A2P43004 574 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 ARCN1P48444 511 aaKnown RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 PRLHRP49683 370 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 NOVA1P51513 510 aaKnown RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 MPP1Q00013 466 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 B4GALNT1Q00973 533 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 MGAT5Q09328 741 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 NFE2L1Q14494 772 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 SLMAPQ14BN4 828 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 TMED2Q15363 201 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 TRIP6Q15654 476 aaKnown RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 UAP1Q16222 522 aaPredicted RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 KYNUQ16719 465 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 BCL7AQ4VC05 210 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 C6orf132Q5T0Z8 1188 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 LVRNQ6Q4G3 990 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 PACS1Q6VY07 963 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 C3orf62Q6ZUJ4 267 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 LRRC6Q86X45 466 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 CILP2Q8IUL8 1156 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 ZNF547Q8IVP9 402 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 DENND6AQ8IWF6 608 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 CTAGE3PQ8IX95 158 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 UNC5BQ8IZJ1 945 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 ARL10Q8N8L6 244 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 GPR150Q8NGU9 434 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 OR2L2Q8NH16 312 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 HM13Q8TCT9 377 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 MAPK15Q8TD08 544 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 SKA2Q8WVK7 121 aaPredicted RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 SEC14L1Q92503 715 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 CXorf40BQ96DE9 158 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 MRRFQ96E11 262 aaKnown RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 CCDC97Q96F63 343 aaPredicted RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 SCARF2Q96GP6 870 aaPredicted RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 ATXN7L3BQ96GX2 97 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 SGSM3Q96HU1 749 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 APOLD1Q96LR9 279 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 PANX3Q96QZ0 392 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 PHACTR1Q9C0D0 580 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 ABCG4Q9H172 646 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 PRDM8Q9NQV8 689 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 ZDHHC18Q9NUE0 388 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 SPATS2LQ9NUQ6 558 aaKnown RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 NSMCE4AQ9NXX6 385 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 NCKIPSDQ9NZQ3 722 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 SLC23A2Q9UGH3 650 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 FBXO5Q9UKT4 447 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 PCOLCE2Q9UKZ9 415 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 PSMD13Q9UNM6 376 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 PCDHB1Q9Y5F3 818 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 PCYT1BQ9Y5K3 369 aaPredicted RBP6.21□□□□□ -1.42
LTBR-212ENST00000543542 PRSS21Q9Y6M0 314 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 WDR87Q6ZQQ6 2873 aa6.21□□□□□ -1.42
LTBR-212ENST00000543542 ZFC3H1O60293 1989 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 IGLV3-16A0A075B6K0 115 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 C17orf113A0A1B0GUU1 675 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 DCDC2BA2VCK2 349 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 OR5K4A6NMS3 321 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 IQCF5A8MTL0 148 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 IFRD1O00458 451 aaPredicted RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 TRIM38O00635 465 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 LIN7AO14910 233 aaPredicted RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 KPNA5O15131 536 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 TP73O15350 636 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 ZW10O43264 779 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 TNFSF14O43557 240 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 VPS26AO75436 327 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 HAUS5O94927 633 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 ACSL3O95573 720 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 VIPP01282 170 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 ESR1P03372 595 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 APOA4P06727 396 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 F7P08709 466 aaPredicted RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 GSTM1P09488 218 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 F3P13726 295 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 PKMP14618 531 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 CKMT2P17540 419 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 MCM3P25205 808 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms