RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 APOBEC2Q9Y235 224 aaKnown RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 MTO1Q9Y2Z2 717 aaKnown RBP11.38□□□□□ -0.59
COPS7A-217ENST00000543537 PCDHGC4Q9Y5F7 938 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 WDFY3Q8IZQ1 3526 aa11.38□□□□□ -0.59
COPS7A-217ENST00000543537 KNTC1P50748 2209 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 ZFHX4Q86UP3 3567 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBC1D3DA0A087WVF3 549 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBC1D3IA0A087WXS9 549 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBC1D3EA0A087X179 549 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBC1D3KA0A087X1G2 549 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBC1D3FA6NER0 549 aaPredicted RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 CAPN8A6NHC0 703 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBC1D3LB9A6J9 549 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 H0Y8X5 98 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 HYAL3O43820 417 aaPredicted RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TRIM13O60858 407 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TOP3BO95985 862 aaKnown RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 GOT2P00505 430 aaKnown RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBC1D3HP0C7X1 549 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 FTH1P19P0C7X4 201 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 ITGALP20701 1170 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 GLDCP23378 1020 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 ARNTP27540 789 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 CSRP3P50461 194 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 RASSF2P50749 326 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 PPP2CBP62714 309 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 PPP2CAP67775 309 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TMPRSS15P98073 1019 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TRAF2Q12933 501 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 ITGA9Q13797 1035 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 BMPR2Q13873 1038 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBC1D3GQ6DHY5 549 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBC1D3CQ6IPX1 549 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 LAYNQ6UX15 382 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 LINGO4Q6UY18 593 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBC1D3Q8IZP1 549 aaPredicted RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 RYBPQ8N488 228 aaPredicted RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 OXR1Q8N573 874 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TMEM145Q8NBT3 493 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 ZBTB9Q96C00 473 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 ELMO2Q96JJ3 720 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TBATAQ96M53 351 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 ZNF778Q96MU6 729 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 PLEKHG4BQ96PX9 1271 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 ELAC2Q9BQ52 826 aaKnown RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 TRMOQ9BU70 441 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 MRPL46Q9H2W6 279 aaKnown RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 ACTR5Q9H9F9 607 aaPredicted RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 IL17CQ9P0M4 197 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 NFKBIL1Q9UBC1 381 aaPredicted RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 COPG2Q9UBF2 871 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 FCF1Q9Y324 198 aaKnown RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 PSAT1Q9Y617 370 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 PLXNA2O75051 1894 aa11.37□□□□□ -0.59
COPS7A-217ENST00000543537 COL5A1P20908 1838 aaPredicted RBP11.37□□□□□ -0.59
COPS7A-217ENST00000543537 ARID1BQ8NFD5 2236 aaPredicted RBP11.36□□□□□ -0.59
COPS7A-217ENST00000543537 TSPAN11A1L157 253 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 CCDC162PA2VCL2 907 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 SYCE1LA8MT33 242 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 TLR4O00206 839 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 PSMD11O00231 422 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 EIF3FO00303 357 aaPredicted RBP11.36□□□□□ -0.59
COPS7A-217ENST00000543537 WNT9AO14904 365 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 KPNA5O15131 536 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 AP1G1O43747 822 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 UGT1A9O60656 530 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 MAGEC1O60732 1142 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 VPS26AO75436 327 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 PROCP04070 461 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 CAPNS1P04632 268 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 LTA4HP09960 611 aaKnown RBP11.36□□□□□ -0.59
COPS7A-217ENST00000543537 MYL2P10916 166 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 XPAP23025 273 aaPredicted RBP11.36□□□□□ -0.59
COPS7A-217ENST00000543537 RPS3P23396 243 aaKnown RBP eCLIP11.36□□□□□ -0.59
COPS7A-217ENST00000543537 NUMBP49757 651 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 C21orf59P57076 290 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 NXPH1P58417 271 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 DNAJB13P59910 316 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 GALNT1Q10472 559 aaPredicted RBP11.36□□□□□ -0.59
COPS7A-217ENST00000543537 CTBP1Q13363 440 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 OLIG2Q13516 323 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 GALNT3Q14435 633 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 SHBQ15464 509 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 INAVAQ3KP66 663 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 SETMARQ53H47 684 aaPredicted RBP11.36□□□□□ -0.59
COPS7A-217ENST00000543537 ERAP2Q6P179 960 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 GDPD4Q6W3E5 623 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 DPY19L3Q6ZPD9 716 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 PIWIL4Q7Z3Z4 852 aaKnown RBP11.36□□□□□ -0.59
COPS7A-217ENST00000543537 SNX20Q7Z614 316 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 PTAR1Q7Z6K3 402 aaPredicted RBP11.36□□□□□ -0.59
COPS7A-217ENST00000543537 UNC5BQ8IZJ1 945 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 CHCHD4Q8N4Q1 142 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 GPATCH11Q8N954 259 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 ARMC2Q8NEN0 867 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 OR4K2Q8NGD2 314 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 RHEBL1Q8TAI7 183 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 SAP25Q8TEE9 199 aa11.36□□□□□ -0.59
COPS7A-217ENST00000543537 SETD7Q8WTS6 366 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms