RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TRIM64CA6NLI5 447 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 UBE2Q2LH0YL09 131 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 TRIM77I1YAP6 450 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 INPPL1O15357 1258 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 EIF3DO15371 548 aaKnown RBP eCLIP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 VEGFDO43915 354 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 SOCS5O75159 536 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 CREG1O75629 220 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 REC8O95072 547 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 PLAUP00749 431 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 RLN1P04808 185 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 TFEBP19484 476 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 ITIH1P19827 911 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 SCP2P22307 547 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 UBA1P22314 1058 aaKnown RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 EEF1B2P24534 225 aaKnown RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 HOXC9P31274 260 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 ZNF81P51508 661 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 GPC3P51654 580 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 ADARP55265 1226 aaKnown RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 KIAA1024LP59773 190 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 PPP2R2BQ00005 443 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 HSPB3Q12988 150 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 PRKD1Q15139 912 aaPredicted RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 RPS6KA1Q15418 735 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 PROSER3Q2NL68 480 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 KBTBD12Q3ZCT8 623 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 NCAPH2Q6IBW4 605 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 PLEKHA7Q6IQ23 1121 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 HEPHL1Q6MZM0 1159 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 KCNV1Q6PIU1 500 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 DET1Q7L5Y6 550 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 CCDC190Q86UF4 302 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 TMEM173Q86WV6 379 aaPredicted RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 GALNT16Q8N428 558 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 LPCAT1Q8NF37 534 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 DBF4BQ8NFT6 615 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 OCC1Q8TAD7 63 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 ST7LQ8TDW4 575 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 ACTRT2Q8TDY3 377 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 TAS1R2Q8TE23 839 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 HASPINQ8TF76 798 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 ANP32BQ92688 251 aaKnown RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 MIB2Q96AX9 1013 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 LRRC3BQ96PB8 259 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 MS4A10Q96PG2 267 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 GAL3ST4Q96RP7 486 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 HNRNPABQ99729 332 aaKnown RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 TRIM7Q9C029 511 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 ZNF350Q9GZX5 532 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 LHPPQ9H008 270 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 LIN28AQ9H9Z2 209 aaKnown RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 MLXIPLQ9NP71 852 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 RRAGDQ9NQL2 400 aaPredicted RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 DNAJC17Q9NVM6 304 aaKnown RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 CISD1Q9NZ45 108 aaKnown RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 ACTR3BQ9P1U1 418 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 VPS18Q9P253 973 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 TRPC4Q9UBN4 977 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 OR14J1Q9UGF5 321 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 XPO7Q9UIA9 1087 aaKnown RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 PIN4Q9Y237 131 aaKnown RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 RAP2CQ9Y3L5 183 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 NCOA2Q15596 1464 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 PLEKHH2Q8IVE3 1493 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 PRDM15P57071 1507 aaPredicted RBP3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 EP400Q96L91 3159 aa3.9□□□□□ -1.79
SFSWAP-211ENST00000542813 SETD5Q9C0A6 1442 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 AHDC1Q5TGY3 1603 aaPredicted RBP3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 RGSL1A5PLK6 1076 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 DPPA5A6NC42 116 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 TMEM8BA6NDV4 472 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 YDJCA8MPS7 323 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 RHODO00212 210 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 MPHOSPH10O00566 681 aaKnown RBP3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 ST8SIA3O43173 380 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 ZBTB43O43298 467 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 RGS11O94810 467 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 TOMM70O94826 608 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 DDHD2O94830 711 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 WNT1P04628 370 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 MMP3P08254 477 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 NR2F2P24468 414 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 CHATP28329 748 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 SLC16A2P36021 539 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 ZNF75DP51815 510 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 LIMK1P53667 647 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 CASP9P55211 416 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 UBASH3AP57075 661 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 HTD2P86397 168 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 FAM27E3Q08E93 113 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 KLHL30Q0D2K2 578 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 FAM153CQ494X1 144 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 FUT11Q495W5 492 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 KLHL26Q53HC5 615 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 MDH1BQ5I0G3 518 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 KCNT1Q5JUK3 1230 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 MIIPQ5JXC2 388 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 SIGIRRQ6IA17 410 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 CEP85Q6P2H3 762 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms