RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ITGALP20701 1170 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 IDSP22304 550 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 MSNP26038 577 aaKnown RBP9.55□□□□□ -0.88
YBX3-212ENST00000542002 IVDP26440 423 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 ARNTP27540 789 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 PBLDP30039 288 aaPredicted RBP9.55□□□□□ -0.88
YBX3-212ENST00000542002 CSF2RBP32927 897 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 GPR3P46089 330 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 NPY2RP49146 381 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 FNTAP49354 379 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 HHEXQ03014 270 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 DMPKQ09013 629 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 SQSTM1Q13501 440 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 GTF2H3Q13889 308 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 KIR2DS5Q14953 304 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 BCL7AQ4VC05 210 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 AGAP9Q5VTM2 703 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 WASH2PQ6VEQ5 465 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 SLITRK4Q8IW52 837 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 CFAP206Q8IYR0 622 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 NAT8LQ8N9F0 302 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 OR2L2Q8NH16 312 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 ZCCHC14Q8WYQ9 949 aaKnown RBP9.55□□□□□ -0.88
YBX3-212ENST00000542002 ULK4Q96C45 1275 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 MFSD3Q96ES6 412 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 FCRL3Q96P31 734 aaPredicted RBP9.55□□□□□ -0.88
YBX3-212ENST00000542002 SLC38A3Q99624 504 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 COPS8Q99627 209 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 NAPGQ99747 312 aaPredicted RBP9.55□□□□□ -0.88
YBX3-212ENST00000542002 NRTNQ99748 197 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 KIFC1Q9BW19 673 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 CCDC86Q9H6F5 360 aaKnown RBP9.55□□□□□ -0.88
YBX3-212ENST00000542002 SLC40A1Q9NP59 571 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 SARS2Q9NP81 518 aaKnown RBP9.55□□□□□ -0.88
YBX3-212ENST00000542002 WASH6PQ9NQA3 447 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 KCNK4Q9NYG8 393 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.55□□□□□ -0.88
YBX3-212ENST00000542002 OGFRQ9NZT2 677 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 DKK4Q9UBT3 224 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 PCYOX1Q9UHG3 505 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 RIMKLBQ9ULI2 386 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 SATB2Q9UPW6 733 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 RAXQ9Y2V3 346 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 AK5Q9Y6K8 562 aa9.55□□□□□ -0.88
YBX3-212ENST00000542002 RP1P56715 2156 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 IGHV5-10-1A0A0J9YXX1 117 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 CTAGE9A4FU28 777 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 SRRM3A6NNA2 597 aaPredicted RBP9.54□□□□□ -0.88
YBX3-212ENST00000542002 PDZK1P1A8MUH7 402 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 KCNJ13O60928 360 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 POLBP06746 335 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 HGFP14210 728 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 PDHA2P29803 388 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 ARCN1P48444 511 aaKnown RBP9.54□□□□□ -0.88
YBX3-212ENST00000542002 LSSP48449 732 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 PRLHRP49683 370 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 CDK16Q00536 496 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 RPE65Q16518 533 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 NAPRTQ6XQN6 538 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 NLRP9Q7RTR0 991 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 SLC9B2Q86UD5 537 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 PIM3Q86V86 326 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 PROSER1Q86XN7 944 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 KLHL7Q8IXQ5 586 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 RCBTB1Q8NDN9 531 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 OR6P1Q8NGX9 317 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 OR4L1Q8NH43 312 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 WDR48Q8TAF3 677 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 JPH3Q8WXH2 748 aaPredicted RBP9.54□□□□□ -0.88
YBX3-212ENST00000542002 SLCO2A1Q92959 643 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 DCUN1D1Q96GG9 259 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 SGSM3Q96HU1 749 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 ZNF514Q96K75 400 aaPredicted RBP9.54□□□□□ -0.88
YBX3-212ENST00000542002 SLC46A1Q96NT5 459 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 INSM2Q96T92 566 aaPredicted RBP9.54□□□□□ -0.88
YBX3-212ENST00000542002 ZCCHC2Q9C0B9 1178 aaKnown RBP9.54□□□□□ -0.88
YBX3-212ENST00000542002 IL22Q9GZX6 179 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 WWP1Q9H0M0 922 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 POLR1BQ9H9Y6 1135 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 FAM8A1Q9UBU6 413 aa9.54□□□□□ -0.88
YBX3-212ENST00000542002 CFAP20Q9Y6A4 193 aaKnown RBP9.54□□□□□ -0.88
YBX3-212ENST00000542002 GOLGA4Q13439 2230 aaKnown RBP9.54□□□□□ -0.88
YBX3-212ENST00000542002 ACACBO00763 2458 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 ARHGEF17Q96PE2 2063 aaPredicted RBP9.53□□□□□ -0.88
YBX3-212ENST00000542002 TMEM8BA6NDV4 472 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 OR5K4A6NMS3 321 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 IQCF5A8MTL0 148 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 GOLGA8KD6RF30 607 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 GOLGA8TH3BQL2 631 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 TP73O15350 636 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 CPNE6O95741 557 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 GAS8O95995 478 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 F7P08709 466 aaPredicted RBP9.53□□□□□ -0.88
YBX3-212ENST00000542002 CCKBRP32239 447 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 MAGEA3P43357 314 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 INHBCP55103 352 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 GABREP78334 506 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 MRPS25P82663 173 aaKnown RBP9.53□□□□□ -0.88
YBX3-212ENST00000542002 BIRC2Q13490 618 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 GPR18Q14330 331 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms