RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 GALNT11Q8NCW6 608 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 ELOA3Q8NG57 546 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 MYCBPAPQ8TBZ2 947 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 KLHDC7BQ96G42 594 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 ZSWIM3Q96MP5 696 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 SLC39A8Q9C0K1 460 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 PRDM12Q9H4Q4 367 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 USP29Q9HBJ7 922 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 B3GAT2Q9NPZ5 323 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 GIN1Q9NXP7 522 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 STOML2Q9UJZ1 356 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 GMPPBQ9Y5P6 360 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 GRIN2DO15399 1336 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 FAM86C2PA6NEL3 165 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 C9JVG2 144 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 TBX18O95935 607 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 CLCNKAP51800 687 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 CDH11P55287 796 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 ARG2P78540 354 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 DSG2Q14126 1118 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 PON2Q15165 354 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 NNATQ16517 81 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 SNAPC1Q16533 368 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 SLC9B1Q4ZJI4 515 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 PCID2Q5JVF3 399 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 C9orf57Q5W0N0 161 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 CCNJLQ8IV13 435 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 ZNF296Q8WUU4 475 aaPredicted RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 CASKIN2Q8WXE0 1202 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 CLP1Q92989 425 aaKnown RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 OR8D2Q9GZM6 311 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 OSBPL3Q9H4L5 887 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 SAMD4AQ9UPU9 718 aaKnown RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 BACE2Q9Y5Z0 518 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 A0A1W2PQ72 361 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 ZNF860A6NHJ4 632 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 CLOCKO15516 846 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 SHOX2O60902 331 aaPredicted RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 PRAMEF1O95521 474 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 SYPP08247 313 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 POLR2CP19387 275 aaPredicted RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 TACR2P21452 398 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 IL12RB1P42701 662 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 CAV3P56539 151 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 ANTXR2P58335 489 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 RPS15P62841 145 aaKnown RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 SNTA1Q13424 505 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 ZNF792Q3KQV3 632 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 KCTD21Q4G0X4 260 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 RAET1LQ5VY80 246 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 PRICKLE2Q7Z3G6 844 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 MREGQ8N565 214 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 DHRSXQ8N5I4 330 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 DDHD1Q8NEL9 900 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 SNRNP25Q9BV90 132 aaKnown RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 CDC42EP4Q9H3Q1 356 aaKnown RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 FBRSL1Q9HCM7 1045 aaKnown RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 CCNB1IP1Q9NPC3 277 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 MKKSQ9NPJ1 570 aaPredicted RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 C11orf16Q9NQ32 467 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 SPATA7Q9P0W8 599 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 GPR34Q9UPC5 381 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 TMEM5Q9Y2B1 443 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 YY2O15391 372 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 SLC26A4O43511 780 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 CPNE3O75131 537 aaKnown RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 GRIA3P42263 894 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 GPD2P43304 727 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 ASMTP46597 345 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 AP1S1P61966 158 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 DSC2Q02487 901 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 RASGEF1BQ0VAM2 473 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 GXYLT1Q4G148 440 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 PRRT3Q5FWE3 981 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 APOBEC3HQ6NTF7 200 aaKnown RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 OTOP1Q7RTM1 612 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 GPR180Q86V85 440 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 ZDHHC17Q8IUH5 632 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 PXYLP1Q8TE99 480 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 LRRC58Q96CX6 371 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 SDHAF3Q9NRP4 125 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 ETNK2Q9NVF9 386 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 PLEKHA6Q9Y2H5 1048 aa6.25□□□□□ -1.41
DMD-228ENST00000541735 DNMT1P26358 1616 aaKnown RBP6.25□□□□□ -1.41
DMD-228ENST00000541735 F8VZ95 297 aa6.24□□□□□ -1.41
DMD-228ENST00000541735 FOXP2O15409 715 aa6.24□□□□□ -1.41
DMD-228ENST00000541735 LSM8O95777 96 aaKnown RBP6.24□□□□□ -1.41
DMD-228ENST00000541735 ABOP16442 354 aa6.24□□□□□ -1.41
DMD-228ENST00000541735 HSPA7P48741 367 aa6.24□□□□□ -1.41
DMD-228ENST00000541735 ZNF41P51814 821 aaPredicted RBP6.24□□□□□ -1.41
DMD-228ENST00000541735 NCBP2P52298 156 aaKnown RBP eCLIP6.24□□□□□ -1.41
DMD-228ENST00000541735 CDK18Q07002 472 aa6.24□□□□□ -1.41
DMD-228ENST00000541735 BMT2Q1RMZ1 405 aa6.24□□□□□ -1.41
DMD-228ENST00000541735 ALG10Q5BKT4 473 aa6.24□□□□□ -1.41
DMD-228ENST00000541735 EEF1DP3Q658K8 133 aa6.24□□□□□ -1.41
DMD-228ENST00000541735 FIP1L1Q6UN15 594 aaKnown RBP6.24□□□□□ -1.41
DMD-228ENST00000541735 DPY19L4Q7Z388 723 aa6.24□□□□□ -1.41
DMD-228ENST00000541735 AMZ2Q86W34 360 aa6.24□□□□□ -1.41
DMD-228ENST00000541735 NKAPQ8N5F7 415 aaKnown RBP6.24□□□□□ -1.41
DMD-228ENST00000541735 ZBTB2Q8N680 514 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms