RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 DTX3LQ8TDB6 740 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 KCNJ9Q92806 393 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 FOXJ1Q92949 421 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 ULK4Q96C45 1275 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 GPR21Q99679 349 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 NSRP1Q9H0G5 558 aaKnown RBP27.43■■□□□ 1.98
CCM2-218ENST00000541586 EBF2Q9HAK2 575 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 FZD3Q9NPG1 666 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 GALPQ9UBC7 116 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 TMPRSS11EQ9UL52 423 aa27.43■■□□□ 1.98
CCM2-218ENST00000541586 OAS3Q9Y6K5 1087 aaKnown RBP27.43■■□□□ 1.98
CCM2-218ENST00000541586 PLXNA2O75051 1894 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 VPS26AO75436 327 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 RECQL5O94762 991 aaPredicted RBP27.42■■□□□ 1.98
CCM2-218ENST00000541586 SBK3P0C264 359 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 CHI3L2Q15782 390 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 C10orf107Q8IVU9 208 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 ATOH1Q92858 354 aaPredicted RBP27.42■■□□□ 1.98
CCM2-218ENST00000541586 COQ10AQ96MF6 247 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 RIOK2Q9BVS4 552 aaKnown RBP27.42■■□□□ 1.98
CCM2-218ENST00000541586 MIR1-1HGQ9H1L0 117 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 ZDHHC3Q9NYG2 299 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 XPR1Q9UBH6 696 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 EIF2B4Q9UI10 523 aaKnown RBP27.42■■□□□ 1.98
CCM2-218ENST00000541586 THADAQ6YHU6 1953 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 PLXNB3Q9ULL4 1909 aa27.42■■□□□ 1.98
CCM2-218ENST00000541586 KLF11O14901 512 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 PYGLP06737 847 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 CCR5P51681 352 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 KPNA2P52292 529 aaKnown RBP27.41■■□□□ 1.98
CCM2-218ENST00000541586 ITIH4Q14624 930 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 PMS2CLQ68D20 193 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 PAQR3Q6TCH7 311 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 NRSN1Q8IZ57 195 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 TRAM1L1Q8N609 369 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 CLDN19Q8N6F1 224 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 NAT14Q8WUY8 206 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 PITPNM3Q9BZ71 974 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 ABCG8Q9H221 673 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 PRSS21Q9Y6M0 314 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 IQCF5A8MTL0 148 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 TARM1B6A8C7 271 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 WNT9AO14904 365 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 CHRM3P20309 590 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 CES4AQ5XG92 561 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 PTRHD1Q6GMV3 140 aaKnown RBP27.41■■□□□ 1.98
CCM2-218ENST00000541586 RAVER1Q8IY67 606 aaKnown RBP27.41■■□□□ 1.98
CCM2-218ENST00000541586 RAB3IL1Q8TBN0 382 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 RDH11Q8TC12 318 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 COPS8Q99627 209 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 SLC30A3Q99726 388 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 MRPL57Q9BQC6 102 aaKnown RBP27.41■■□□□ 1.98
CCM2-218ENST00000541586 ZSCAN5AQ9BUG6 496 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 C1QTNF2Q9BXJ5 285 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 MRPL46Q9H2W6 279 aaKnown RBP27.41■■□□□ 1.98
CCM2-218ENST00000541586 SYTL2Q9HCH5 934 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 SMOXQ9NWM0 555 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 GNPTGQ9UJJ9 305 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 MID2Q9UJV3 735 aa27.41■■□□□ 1.98
CCM2-218ENST00000541586 E5RI56 91 aa27.4■■□□□ 1.98
CCM2-218ENST00000541586 EDF1O60869 148 aaKnown RBP27.4■■□□□ 1.98
CCM2-218ENST00000541586 KLC3Q6P597 504 aa27.4■■□□□ 1.98
CCM2-218ENST00000541586 SIDT2Q8NBJ9 832 aaKnown RBP27.4■■□□□ 1.98
CCM2-218ENST00000541586 DTD2Q96FN9 168 aa27.4■■□□□ 1.98
CCM2-218ENST00000541586 PCED1AQ9H1Q7 454 aa27.4■■□□□ 1.98
CCM2-218ENST00000541586 TRMT6Q9UJA5 497 aaKnown RBP27.4■■□□□ 1.98
CCM2-218ENST00000541586 PLXND1Q9Y4D7 1925 aa27.4■■□□□ 1.98
CCM2-218ENST00000541586 IGLV3-16A0A075B6K0 115 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 LATO43561 262 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 MYL2P10916 166 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 FGF3P11487 239 aaPredicted RBP27.39■■□□□ 1.98
CCM2-218ENST00000541586 NSG1P42857 185 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 B4GALNT1Q00973 533 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 ACAP2Q15057 778 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 TECRLQ5HYJ1 363 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 ATG16L1Q676U5 607 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 ZYG11AQ6WRX3 759 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 ZCCHC23Q6ZST2 131 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 CYP2U1Q7Z449 544 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 GIMAP7Q8NHV1 300 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 CD200R1Q8TD46 325 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 AP2M1Q96CW1 435 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 FAM86C1Q9NVL1 165 aa27.39■■□□□ 1.98
CCM2-218ENST00000541586 A0A1W2PPC4 97 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 FADS2P1A8MWK0 482 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 ITPKAP23677 461 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 SKIV2L2P42285 1042 aaKnown RBP27.38■■□□□ 1.97
CCM2-218ENST00000541586 CLCN7P51798 805 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 BST1Q10588 318 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 GPRC6AQ5T6X5 926 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 CGB2Q6NT52 195 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 MACC1Q6ZN28 852 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 NUS1Q96E22 293 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 ZC3H10Q96K80 434 aaKnown RBP27.38■■□□□ 1.97
CCM2-218ENST00000541586 ELAC2Q9BQ52 826 aaKnown RBP27.38■■□□□ 1.97
CCM2-218ENST00000541586 CA5BQ9Y2D0 317 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 H3BMM5 538 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 RAD51BO15315 384 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 CD1DP15813 335 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 WDR45BQ5MNZ6 344 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms