RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ADAMTS18Q8TE60 1221 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 TMEM158Q8WZ71 300 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 N4BP2L2Q92802 583 aaPredicted RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 POLDIP3Q9BY77 421 aaKnown RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 ABCG8Q9H221 673 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 ZNF395Q9H8N7 513 aaPredicted RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 SP110Q9HB58 689 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 MRM3Q9HC36 420 aaKnown RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 IFT80Q9P2H3 777 aaPredicted RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 ZNF624Q9P2J8 865 aaPredicted RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 TINAGQ9UJW2 476 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 MRPS2Q9Y399 296 aaKnown RBP9.22□□□□□ -0.93
YBX3-211ENST00000541351 AP1M2Q9Y6Q5 423 aa9.22□□□□□ -0.93
YBX3-211ENST00000541351 HIVEP2P31629 2446 aa9.21□□□□□ -0.93
YBX3-211ENST00000541351 TMEM150CB9EJG8 249 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 E9PLN8 166 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 MATN2O00339 956 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 KMOO15229 486 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 ATP1A1P05023 1023 aaKnown RBP9.21□□□□□ -0.94
YBX3-211ENST00000541351 FDXRP22570 491 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 MMP11P24347 488 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 SDC4P31431 198 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 HTR7P34969 479 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 PREPP48147 710 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 DCDP81605 110 aaKnown RBP9.21□□□□□ -0.94
YBX3-211ENST00000541351 ATP11AP98196 1134 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 TDRD12Q587J7 1177 aaKnown RBP9.21□□□□□ -0.94
YBX3-211ENST00000541351 RALGPS1Q5JS13 557 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 AGAP9Q5VTM2 703 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 RESP18Q5W5W9 173 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 LINC00696Q6ZRV3 163 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 BNIPLQ7Z465 357 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 SPPL2CQ8IUH8 684 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 DMRTC2Q8IXT2 367 aaPredicted RBP9.21□□□□□ -0.94
YBX3-211ENST00000541351 WDTC1Q8N5D0 677 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 EHBP1Q8NDI1 1231 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 THAP3Q8WTV1 239 aaPredicted RBP9.21□□□□□ -0.94
YBX3-211ENST00000541351 CFAP57Q96MR6 1250 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 TAAR6Q96RI8 345 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 VKORC1Q9BQB6 163 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 TIMM29Q9BSF4 260 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 TMEM121Q9BTD3 319 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.21□□□□□ -0.94
YBX3-211ENST00000541351 PDFQ9HBH1 243 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 UBE2TQ9NPD8 197 aaPredicted RBP9.21□□□□□ -0.94
YBX3-211ENST00000541351 KCNJ16Q9NPI9 418 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 CD84Q9UIB8 345 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 FBXL4Q9UKA2 621 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 SIK3Q9Y2K2 1263 aa9.21□□□□□ -0.94
YBX3-211ENST00000541351 C17orf113A0A1B0GUU1 675 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 CCDC78A2IDD5 438 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 OR5K3A6NET4 321 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 NPIPB15A6NHN6 443 aaPredicted RBP9.2□□□□□ -0.94
YBX3-211ENST00000541351 USP1O94782 785 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 ZRANB2O95218 330 aaKnown RBP eCLIP9.2□□□□□ -0.94
YBX3-211ENST00000541351 TSPAN12O95859 305 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 IFNA2P01563 188 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 UNGP13051 313 aaPredicted RBP9.2□□□□□ -0.94
YBX3-211ENST00000541351 ABOP16442 354 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 LHCGRP22888 699 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 FLT3P36888 993 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 TNFSF10P50591 281 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 LRRC63Q05C16 580 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 ABRQ12979 859 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 TUBB8Q3ZCM7 444 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 CCDC40Q4G0X9 1142 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 ARMC12Q5T9G4 340 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 LRRC66Q68CR7 880 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 NAPRTQ6XQN6 538 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 Q6ZPB1 254 aaPredicted RBP9.2□□□□□ -0.94
YBX3-211ENST00000541351 STRADAQ7RTN6 431 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 PPP1R32Q7Z5V6 425 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 ARHGEF19Q8IW93 802 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 CCDC110Q8TBZ0 833 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 ZFPM2Q8WW38 1151 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 SCAMP4Q969E2 229 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 NTAN1Q96AB6 310 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 THOC3Q96J01 351 aaKnown RBP9.2□□□□□ -0.94
YBX3-211ENST00000541351 KREMEN1Q96MU8 473 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 MCCC1Q96RQ3 725 aaPredicted RBP9.2□□□□□ -0.94
YBX3-211ENST00000541351 SMR3AQ99954 134 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 TLR10Q9BXR5 811 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 KLC2Q9H0B6 622 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 NOL6Q9H6R4 1146 aaKnown RBP9.2□□□□□ -0.94
YBX3-211ENST00000541351 NEUROD4Q9HD90 331 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 SLC6A20Q9NP91 592 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 TXLNGQ9NUQ3 528 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 FANCLQ9NW38 375 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 HRASLS2Q9NWW9 162 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 CDC23Q9UJX2 597 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 SEC16AO15027 2179 aa9.2□□□□□ -0.94
YBX3-211ENST00000541351 FAM237BA0A1B0GVD1 139 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 HAX1O00165 279 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 PRRG2O14669 202 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 ARHGEF9O43307 516 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 ZNF749O43361 778 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 PROM1O43490 865 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 ACTN4O43707 911 aaKnown RBP9.19□□□□□ -0.94
YBX3-211ENST00000541351 KCNJ13O60928 360 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 HOXD4P09016 255 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms