RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 NUSAP1Q9BXS6 441 aaKnown RBP10.3□□□□□ -0.76
CHFR-219ENST00000541341 UGT2B28Q9BY64 529 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 LMAN1LQ9HAT1 526 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 ZFP14Q9HCL3 533 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 RIC8BQ9NVN3 520 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 ZSCAN32Q9NX65 697 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 DUS2Q9NX74 493 aaKnown RBP10.3□□□□□ -0.76
CHFR-219ENST00000541341 ARHGEF38Q9NXL2 777 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 DLL3Q9NYJ7 618 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 SELENONQ9NZV5 590 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 XPR1Q9UBH6 696 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 SUN2Q9UH99 717 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 ZNF639Q9UID6 485 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 CDH9Q9ULB4 789 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 TRAF6Q9Y4K3 522 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 ORC6Q9Y5N6 252 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 PIAS3Q9Y6X2 628 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 SPAG17Q6Q759 2223 aa10.3□□□□□ -0.76
CHFR-219ENST00000541341 ANAPC1Q9H1A4 1944 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 CACNA1AO00555 2505 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 HTR3EA5X5Y0 456 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 PFDN6O15212 129 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 FGF10O15520 208 aaPredicted RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 MFSD11O43934 449 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 MOSPD3O75425 235 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 GRAP2O75791 330 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 SORBS2O94875 1100 aaKnown RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 ABLIM3O94929 683 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 CHRNGP07510 517 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 LBPP18428 481 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 TFE3P19532 575 aaPredicted RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 LMO2P25791 158 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 HTR1EP28566 365 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 ARRB2P32121 409 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 ADRA1BP35368 520 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 GRIA1P42261 906 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 HALP42357 657 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 RGS7P49802 495 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 NRLP54845 237 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 KCNK10P57789 538 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 PRAMEP78395 509 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 SMARCB1Q12824 385 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 GPR17Q13304 367 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 DGUOKQ16854 277 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 KIF19Q2TAC6 998 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 ZNF528Q3MIS6 628 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 OGFOD2Q6N063 350 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 DUS1LQ6P1R4 473 aaKnown RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 KCTD8Q6ZWB6 473 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 USP51Q70EK9 711 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 BEND5Q7L4P6 421 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 BNIPLQ7Z465 357 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 CUZD1Q86UP6 607 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 DDIASQ8IXT1 998 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 C8orf59Q8N0T1 100 aaPredicted RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 LSMEM2Q8N112 164 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 C2CD4AQ8NCU7 369 aaPredicted RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 SETD9Q8NE22 299 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 OR6B3Q8NGW1 331 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 OR10T2Q8NGX3 314 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 ZSCAN18Q8TBC5 510 aaPredicted RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 SNRNP27Q8WVK2 155 aaKnown RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 C17orf50Q8WW18 174 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 CYGBQ8WWM9 190 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 FATE1Q969F0 183 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 CLDN23Q96B33 292 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 ZFYVE19Q96K21 471 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 ZNF512Q96ME7 567 aaPredicted RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 ZNF641Q96N77 438 aaPredicted RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 ASB16Q96NS5 453 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 FCRL3Q96P31 734 aaPredicted RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 TBL1YQ9BQ87 522 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 MROQ9BYG7 248 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 CRISPLD1Q9H336 500 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 RMND5AQ9H871 391 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 CPNE5Q9HCH3 593 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 ZNF334Q9HCZ1 680 aaPredicted RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 CCNB1IP1Q9NPC3 277 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 NECTIN3Q9NQS3 549 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 ANLNQ9NQW6 1124 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 SMOXQ9NWM0 555 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 GDE1Q9NZC3 331 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 HMGXB4Q9UGU5 601 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 LEF1Q9UJU2 399 aaPredicted RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 CDV3Q9UKY7 258 aaKnown RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 MAFFQ9ULX9 164 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 SLC27A5Q9Y2P5 690 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 FAM32AQ9Y421 112 aaKnown RBP10.29□□□□□ -0.76
CHFR-219ENST00000541341 PCDHGA2Q9Y5H1 932 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 HSPE1-MOB4S4R3N1 261 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 CEP250Q9BV73 2442 aa10.29□□□□□ -0.76
CHFR-219ENST00000541341 A0A1W2PRU2 124 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 PRORSD1PA6NEY8 169 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 HEPACAM2A8MVW5 462 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 CHURC1-FNTBB4DL54 471 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 LSM1O15116 133 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 HCRTO43612 131 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 KDM1AO60341 852 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 LTFP02788 710 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 GFAPP14136 432 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms