RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SWI5Q1ZZU3 235 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 FAM171A1Q5VUB5 890 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 FBXO42Q6P3S6 717 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 OTOP3Q7RTS5 596 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 FBXL8Q96CD0 374 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 LRRC58Q96CX6 371 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 GFM1Q96RP9 751 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 ZNF696Q9H7X3 374 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 SEMA3GQ9NS98 782 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 SEC14L3Q9UDX4 400 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 MLXQ9UH92 298 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 GLDCP23378 1020 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 PSEN2P49810 448 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 ENTPD1P49961 510 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 CLHC1Q8NHS4 586 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 RNASE11Q8TAA1 199 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 TIFAQ96CG3 184 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 MRPL9Q9BYD2 267 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 INTS7Q9NVH2 962 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 CNTN3Q9P232 1028 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 UPB1Q9UBR1 384 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 TCHHQ07283 1943 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 NRCAMQ92823 1304 aa14.81□□□□□ -0.04
SMARCA4-207ENST00000541122 ISPDA4D126 451 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 TRIM64CA6NLI5 447 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 PPP1R11O60927 126 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 PAGE1O75459 146 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 GSTT2BP0CG30 244 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 COL6A1P12109 1028 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 ZNF24P17028 368 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 CD72P21854 359 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 NMBRP28336 390 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 L1CAMP32004 1257 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 SRSF11Q05519 484 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 MOGSQ13724 837 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 ZNF697Q5TEC3 545 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 SLC30A8Q8IWU4 369 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 ZFPM1Q8IX07 1006 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 ZUFSPQ96AP4 578 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 HMGXB4Q9UGU5 601 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 KERAO60938 352 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 HOXA10P31260 410 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 CCR10P46092 362 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 GTF2H2Q13888 395 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 KCNJ11Q14654 390 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 C6orf183Q5T699 404 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 ADNP2Q6IQ32 1131 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 GTF2H2CQ6P1K8 395 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 PCDH19Q8TAB3 1148 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 GAD1Q99259 594 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 GPR21Q99679 349 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 TFB2MQ9H5Q4 396 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 C3orf14Q9HBI5 128 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.8□□□□□ -0.041e-6■□□□□ 11.1
SMARCA4-207ENST00000541122 PCDHGA3Q9Y5H0 932 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 MOXD2PA6NHM9 499 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 GABRDO14764 452 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 NOBOXO60393 691 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 MYCP01106 439 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 HLA-DQA2P01906 255 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 DLDP09622 509 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 GPX6P59796 221 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 ZNF404Q494X3 552 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 NBPF12Q5TAG4 269 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 HLA-DQA1Q5Y7H0 255 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 C16orf59Q7L2K0 433 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 GALNT12Q8IXK2 581 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 ZBTB26Q9HCK0 441 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 ZIM2Q9NZV7 527 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 MYPNQ86TC9 1320 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 MATN3O15232 486 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 TAS2R39P59534 338 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 IQCCQ4KMZ1 466 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 HECTD3Q5T447 861 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 PGBD3Q8N328 593 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 FAM84AQ96KN4 292 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 MIOSQ9NXC5 875 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 TYROBPO43914 113 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 PIRTP0C851 137 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 DNAJA1P31689 397 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 CXCR3P49682 368 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 MANFP55145 182 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 HERVK_113P63132 956 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 WSCD2Q2TBF2 565 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 PITRM1Q5JRX3 1037 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 STX12Q86Y82 276 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 SLC38A4Q969I6 547 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 PGLYRP2Q96PD5 576 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 ERVK-6Q9BXR3 956 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 ACSS2Q9NR19 701 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 SNTG1Q9NSN8 517 aa14.8□□□□□ -0.04
SMARCA4-207ENST00000541122 OR6C70A6NIJ9 312 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 MAGEB17A8MXT2 336 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 YBEYP58557 167 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 CACNG1Q06432 222 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 MAB21L1Q13394 359 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 C9orf57Q5W0N0 161 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 KLHL24Q6TFL4 600 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 ZBTB2Q8N680 514 aa14.79□□□□□ -0.04
SMARCA4-207ENST00000541122 TNFAIP8L1Q8WVP5 186 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms