RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ATP6AP1LQ52LC2 224 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CRTC3Q6UUV7 619 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 IL27RAQ6UWB1 636 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 DLEU7Q6UYE1 221 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CCDC81Q6ZN84 652 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC16A12Q6ZSM3 486 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 NCCRP1Q6ZVX7 275 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 TBC1D21Q8IYX1 336 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 DOCK4Q8N1I0 1966 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 KRTCAP2Q8N6L1 136 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 OR7D4Q8NG98 312 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 BPIFB1Q8TDL5 484 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.24□□□□□ -0.777e-6■■■■■ 27.5
CDC42SE1-207ENST00000540998 TAMM41Q96BW9 452 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 RMDN1Q96DB5 314 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 TRIM54Q9BYV2 358 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 ARNT2Q9HBZ2 717 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 ADARB2Q9NS39 739 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 ABCC13Q9NSE7 274 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CD274Q9NZQ7 290 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 PCTPQ9UKL6 214 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 PAIP2BQ9ULR5 123 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 NOD1Q9Y239 953 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 TRIM17Q9Y577 477 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 KRBA1A5PL33 1030 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 MOXD2PA6NHM9 499 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 HS6ST1O60243 411 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 TLR5O60602 858 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 SULT1C4O75897 302 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 HOXD8P13378 290 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CD52P31358 61 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 FMO3P31513 532 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 STC1P52823 247 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 NFKB2Q00653 900 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 DAG1Q14118 895 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 LAIR1Q6GTX8 287 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 PRMT9Q6P2P2 845 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 FAM171BQ6P995 826 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 SPATA2LQ8IUW3 424 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 RIMKLAQ8IXN7 391 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 FAM126BQ8IXS8 530 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 TMEM86AQ8N2M4 240 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 ATAD1Q8NBU5 361 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 BRI3BPQ8WY22 251 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 MTFMTQ96DP5 389 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 SLC10A4Q96EP9 437 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 CDKN2AIPNLQ96HQ2 116 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 SPON2Q9BUD6 331 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 SUN2Q9UH99 717 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 PCDHGC4Q9Y5F7 938 aa10.24□□□□□ -0.77
CDC42SE1-207ENST00000540998 MYO16Q9Y6X6 1858 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 C17orf102A2RUQ5 167 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 KRT87PA6NCN2 255 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 TNFRSF10BO14763 440 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 CBFA2T3O75081 653 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 EEDO75530 441 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 CLPXO76031 633 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 SEC14L2O76054 403 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 CPNE6O95741 557 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 ODC1P11926 461 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 PFKLP17858 780 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 OR1E1P30953 314 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 VBP1P61758 197 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 NR6A1Q15406 480 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 SMN1Q16637 294 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 MOGQ16653 247 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 RGS21Q2M5E4 152 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 GTF2IRD2BQ6EKJ0 949 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 CXCL17Q6UXB2 119 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 GTF2IRD2Q86UP8 949 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 ANKRD46Q86W74 232 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 RAVER1Q8IY67 606 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 RNF168Q8IYW5 571 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 CHDHQ8NE62 594 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 ZNF420Q8TAQ5 688 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 UBE2FQ969M7 185 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 GFM2Q969S9 779 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 LINGO1Q96FE5 620 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 CCDC138Q96M89 665 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 THUMPD3Q9BV44 507 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 CD320Q9NPF0 282 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 TBCCD1Q9NVR7 557 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 LEF1Q9UJU2 399 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 DNAH14Q0VDD8 3507 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 PATJQ8NI35 1801 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 UPK3BL1B0FP48 263 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 UPK3BL2E5RIL1 263 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 GPR182O15218 404 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 KERAO60938 352 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 PRKD3O94806 890 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 CST1P01037 141 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 CHRNA1P02708 482 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 GP2P55259 537 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 TBX4P57082 545 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 ABRAXAS2Q15018 415 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 TRIM16LQ309B1 348 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 BROXQ5VW32 411 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 SULT1C3Q6IMI6 304 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 MRNIPQ6NTE8 343 aa10.23□□□□□ -0.77
CDC42SE1-207ENST00000540998 MDGA1Q8NFP4 955 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms