RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 PTERQ96BW5 349 aa14.06□□□□□ -0.16
CYB561A3-216ENST00000540755 CCDC126Q96EE4 140 aa14.06□□□□□ -0.16
CYB561A3-216ENST00000540755 DCUN1D1Q96GG9 259 aa14.06□□□□□ -0.16
CYB561A3-216ENST00000540755 PDLIM5Q96HC4 596 aaKnown RBP14.06□□□□□ -0.16
CYB561A3-216ENST00000540755 OSBPL6Q9BZF3 934 aa14.06□□□□□ -0.16
CYB561A3-216ENST00000540755 UNKQ9C0B0 810 aaKnown RBP14.06□□□□□ -0.16
CYB561A3-216ENST00000540755 SPATS2LQ9NUQ6 558 aaKnown RBP14.06□□□□□ -0.16
CYB561A3-216ENST00000540755 THAP1Q9NVV9 213 aa14.06□□□□□ -0.16
CYB561A3-216ENST00000540755 FBXL12Q9NXK8 326 aa14.06□□□□□ -0.16
CYB561A3-216ENST00000540755 MMP17Q9ULZ9 603 aa14.06□□□□□ -0.16
CYB561A3-216ENST00000540755 NCOR2Q9Y618 2525 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 PLRG1O43660 514 aaKnown RBP14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 DLX3O60479 287 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 MAGEC1O60732 1142 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 TM7SF2O76062 418 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 TRIM16O95361 564 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 MSH3P20585 1137 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 ATP5F1P24539 256 aaPredicted RBP14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 ASPHQ12797 758 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 SFSWAPQ12872 951 aaKnown RBP14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 FZD5Q13467 585 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 TTC31Q49AM3 519 aaPredicted RBP14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 CES4AQ5XG92 561 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 ZNF852Q6ZMS4 543 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 USP30Q70CQ3 517 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 KBTBD6Q86V97 674 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 PHYKPLQ8IUZ5 450 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 SPNS2Q8IVW8 549 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 CPNE9Q8IYJ1 553 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 CACNA2D3Q8IZS8 1091 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 STAG3L4Q8TBR4 150 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 CLDN23Q96B33 292 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 LINGO1Q96FE5 620 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 SIPA1Q96FS4 1042 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 ELAC2Q9BQ52 826 aaKnown RBP14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 ALG9Q9H6U8 611 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 SARS2Q9NP81 518 aaKnown RBP14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 FZD4Q9ULV1 537 aa14.05□□□□□ -0.16
CYB561A3-216ENST00000540755 FAM170BA6NMN3 283 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 TMEM114B3SHH9 223 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 EIF3FO00303 357 aaPredicted RBP14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 KERAO60938 352 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 PCDH8O95206 1070 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 TGDSO95455 350 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 LMNAP02545 664 aaKnown RBP14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 GPR1P46091 355 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 RGS4P49798 205 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 HNRNPH2P55795 449 aaKnown RBP14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 DNAJB13P59910 316 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 NFKB2Q00653 900 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 TTLL9Q3SXZ7 439 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 RAET1GQ6H3X3 334 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 KIAA1161Q6NSJ0 714 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 ZCCHC23Q6ZST2 131 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 SLC22A9Q8IVM8 553 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 SYNPOQ8N3V7 929 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 ZBTB2Q8N680 514 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 EEF1AKMT1Q8WVE0 214 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 SEC16BQ96JE7 1060 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 ATOH8Q96SQ7 321 aa14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 SPATA6Q9NWH7 488 aaPredicted RBP14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 CNOT6Q9ULM6 557 aaKnown RBP14.04□□□□□ -0.16
CYB561A3-216ENST00000540755 MTX2O75431 263 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 TPBGLP0DKB5 382 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 CBSLP0DN79 551 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 CHRNB1P11230 501 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 ITGB6P18564 788 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 DGKAP23743 735 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 TEAD1P28347 426 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 CBSP35520 551 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 SLC1A6P48664 564 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 ADPRHP54922 357 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 ABCE1P61221 599 aaKnown RBP14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 OR4D1Q15615 310 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 KHDC1Q4VXA5 237 aaKnown RBP14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 TMEM92Q6UXU6 159 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 SPATA21Q7Z572 469 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 PELI3Q8N2H9 469 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 GANCQ8TET4 914 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 NAT14Q8WUY8 206 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 SGF29Q96ES7 293 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 MRGPRX1Q96LB2 322 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 GATA5Q9BWX5 397 aaPredicted RBP14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 ZCCHC2Q9C0B9 1178 aaKnown RBP14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 SLC6A17Q9H1V8 727 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 PREBQ9HCU5 417 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 KLHL14Q9P2G3 628 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 NDRG2Q9UN36 371 aaKnown RBP14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 NCKAP1Q9Y2A7 1128 aa14.03□□□□□ -0.16
CYB561A3-216ENST00000540755 IGLON5A6NGN9 336 aa14.02□□□□□ -0.16
CYB561A3-216ENST00000540755 SYCE1LA8MT33 242 aa14.02□□□□□ -0.16
CYB561A3-216ENST00000540755 A8MT66 165 aa14.02□□□□□ -0.16
CYB561A3-216ENST00000540755 CHURC1-FNTBB4DL54 471 aa14.02□□□□□ -0.16
CYB561A3-216ENST00000540755 KPNA5O15131 536 aa14.02□□□□□ -0.16
CYB561A3-216ENST00000540755 SGTAO43765 313 aa14.02□□□□□ -0.16
CYB561A3-216ENST00000540755 SMIM24O75264 130 aa14.02□□□□□ -0.16
CYB561A3-216ENST00000540755 IPO13O94829 963 aaKnown RBP14.02□□□□□ -0.16
CYB561A3-216ENST00000540755 FTH1P02794 183 aa14.02□□□□□ -0.16
CYB561A3-216ENST00000540755 TROVE2P10155 538 aaKnown RBP eCLIP14.02□□□□□ -0.16
CYB561A3-216ENST00000540755 SERPINB5P36952 375 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms