RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CRB2Q5IJ48 1285 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 PLEKHS1Q5SXH7 462 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 ALS2CLQ60I27 953 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 HGSNATQ68CP4 663 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 SLC6A19Q695T7 634 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 LCN10Q6JVE6 187 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 IRGCQ6NXR0 463 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 CYB5D1Q6P9G0 228 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 FAM198BQ6UWH4 519 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 HPS6Q86YV9 775 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 TRIM48Q8IWZ4 208 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.15□□□□□ -1.26
YBX3-209ENST00000540747 GLIS1Q8NBF1 620 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 SIDT2Q8NBJ9 832 aaKnown RBP7.15□□□□□ -1.26
YBX3-209ENST00000540747 ANKRD20A12PQ8NF67 263 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 CCHCR1Q8TD31 782 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 DTX3LQ8TDB6 740 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 LRRN4Q8WUT4 740 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 PNPLA2Q96AD5 504 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 ZNF501Q96CX3 271 aaPredicted RBP7.15□□□□□ -1.26
YBX3-209ENST00000540747 IMP4Q96G21 291 aaKnown RBP7.15□□□□□ -1.26
YBX3-209ENST00000540747 BTBD6Q96KE9 485 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 CD180Q99467 661 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 SMAD5Q99717 465 aaKnown RBP7.15□□□□□ -1.26
YBX3-209ENST00000540747 MAP3K3Q99759 626 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 NUDT9Q9BW91 350 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 SPATA16Q9BXB7 569 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 ZFYVE1Q9HBF4 777 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 MAGEE1Q9HCI5 957 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 PDE7BQ9NP56 450 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 FGF21Q9NSA1 209 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 MYO1AQ9UBC5 1043 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 NENFQ9UMX5 172 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 FARSAQ9Y285 508 aaKnown RBP7.15□□□□□ -1.26
YBX3-209ENST00000540747 BTRCQ9Y297 605 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 DNAJC16Q9Y2G8 782 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 ZNF711Q9Y462 761 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 ZNF451Q9Y4E5 1061 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 HIVEP1P15822 2718 aa7.15□□□□□ -1.26
YBX3-209ENST00000540747 CCDC168Q8NDH2 2452 aa7.15□□□□□ -1.27
YBX3-209ENST00000540747 OR5K3A6NET4 321 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 TLCD2A6NGC4 264 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 KCNK1O00180 336 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 GAPDHSO14556 408 aaPredicted RBP7.14□□□□□ -1.27
YBX3-209ENST00000540747 AURKAO14965 403 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 ZNF500O60304 480 aaPredicted RBP7.14□□□□□ -1.27
YBX3-209ENST00000540747 KCNJ13O60928 360 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 CPNE3O75131 537 aaKnown RBP7.14□□□□□ -1.27
YBX3-209ENST00000540747 CDK14O94921 469 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 CBX6O95503 412 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 TPM3P06753 285 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 PIRTP0C851 137 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 SKILP12757 684 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 MX2P20592 715 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 IDSP22304 550 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 CA5AP35218 305 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 CCL11P51671 97 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 ITGA1P56199 1179 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 TUBB4BP68371 445 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 HSD11B2P80365 405 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 PPIDQ08752 370 aaKnown RBP7.14□□□□□ -1.27
YBX3-209ENST00000540747 KLHL30Q0D2K2 578 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 TUBB2AQ13885 445 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 KRT81Q14533 505 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 RPE65Q16518 533 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 EIF2S3LQ2VIR3 472 aaKnown RBP7.14□□□□□ -1.27
YBX3-209ENST00000540747 ATP13A5Q4VNC0 1218 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 FAM182AQ5T1J6 154 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 DCHS2Q6V1P9 2916 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 FAM83HQ6ZRV2 1179 aaPredicted RBP7.14□□□□□ -1.27
YBX3-209ENST00000540747 CARFQ8N187 725 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 PLD5Q8N7P1 536 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 FDCSPQ8NFU4 85 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 OR8K5Q8NH50 307 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 CXorf40BQ96DE9 158 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 C19orf60Q96EN9 201 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 TUBB2BQ9BVA1 445 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 ADGRE3Q9BY15 652 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 XPO4Q9C0E2 1151 aaKnown RBP7.14□□□□□ -1.27
YBX3-209ENST00000540747 THAP2Q9H0W7 228 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 CHST8Q9H2A9 424 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 CASS4Q9NQ75 786 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 RAD18Q9NS91 495 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 ANO10Q9NW15 660 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 IP6K2Q9UHH9 426 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 ANAPC7Q9UJX3 599 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 SHOC2Q9UQ13 582 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 ZKSCAN5Q9Y2L8 839 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 TTLL3Q9Y4R7 772 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 SPO11Q9Y5K1 396 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 CSMD2Q7Z408 3487 aa7.14□□□□□ -1.27
YBX3-209ENST00000540747 DIDO1Q9BTC0 2240 aaKnown RBP7.13□□□□□ -1.27
YBX3-209ENST00000540747 GOLGA6L6A8MZA4 724 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 ZNF487B1APH4 448 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 DPM1O60762 260 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 SCRG1O75711 98 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 MSL3P1P0C860 447 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 VARSP26640 1264 aaKnown RBP7.13□□□□□ -1.27
YBX3-209ENST00000540747 CTSCP53634 463 aa7.13□□□□□ -1.27
YBX3-209ENST00000540747 TAS2R40P59535 323 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms