RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 NRG1Q02297 640 aaPredicted RBP13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 OCA2Q04671 838 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 CHRNB3Q05901 458 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 DGCR6Q14129 220 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 XKR7Q5GH72 579 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 SDHAF4Q5VUM1 108 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 AFMIDQ63HM1 303 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 TXNDC11Q6PKC3 985 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 HDAC2Q92769 488 aaKnown RBP13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 FUBP1Q96AE4 644 aaKnown RBP13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 BRINP2Q9C0B6 783 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 CSNK1G1Q9HCP0 422 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 OSER1Q9NX31 292 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 VAPAQ9P0L0 249 aa13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 EIF2B4Q9UI10 523 aaKnown RBP13.77□□□□□ -0.21
SCNN1A-215ENST00000540037 SLC1A7O00341 560 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 BTN3A1O00481 513 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 MUSKO15146 869 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 FGF10O15520 208 aaPredicted RBP13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 HS6ST1O60243 411 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 RHOBTB1O94844 696 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 SLC26A3P40879 764 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 EMX1Q04741 257 aaPredicted RBP13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 INAQ16352 499 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 FAM98BQ52LJ0 330 aaKnown RBP13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 SPATA19Q7Z5L4 167 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 ZNF583Q96ND8 569 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 ASB2Q96Q27 587 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 MUC13Q9H3R2 512 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 VTA1Q9NP79 307 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 LIMD1Q9UGP4 676 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 F8W810 466 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 KERAO60938 352 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 MITFO75030 526 aaPredicted RBP13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 PAPSS2O95340 614 aaPredicted RBP13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 ANXA6P08133 673 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 HK3P52790 923 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 KCNJ8Q15842 424 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 ATP6AP1LQ52LC2 224 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 CATSPEREQ5SY80 951 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 GALNT5Q7Z7M9 940 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 ZFAND4Q86XD8 727 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 LEMD2Q8NC56 503 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 OR10A6Q8NH74 314 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 ARRDC2Q8TBH0 407 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 B3GALT6Q96L58 329 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 NODALQ96S42 347 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 GPR21Q99679 349 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 C17orf80Q9BSJ5 609 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 OSBPL10Q9BXB5 764 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 SIAEQ9HAT2 523 aa13.76□□□□□ -0.21
SCNN1A-215ENST00000540037 FAM92AA1XBS5 289 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 GNGT2O14610 69 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 TBC1D4O60343 1298 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 TSPAN3O60637 253 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 NDUFS2O75306 463 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 NADKO95544 446 aaPredicted RBP13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 UGT2B4P06133 528 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 RPS17P08708 135 aaKnown RBP13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 PFKLP17858 780 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 TGM1P22735 817 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 FMO3P31513 532 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 SCNN1GP51170 649 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 RENBPP51606 427 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 ISL1P61371 349 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 ERVK-8P63133 956 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 FXNQ16595 210 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 LAIR1Q6GTX8 287 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 SCD5Q86SK9 330 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 FAM126BQ8IXS8 530 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 RHEBL1Q8TAI7 183 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 STAG3L4Q8TBR4 150 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 GLMNQ92990 594 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 KIAA1191Q96A73 305 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 ITPKCQ96DU7 683 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 CGREF1Q99674 301 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 AARSD1Q9BTE6 412 aaKnown RBP13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 TFB2MQ9H5Q4 396 aaKnown RBP13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 HMG20AQ9NP66 347 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 MAGEL2Q9UJ55 1249 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 PCTPQ9UKL6 214 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 CDH9Q9ULB4 789 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 PNMA8BQ9ULN7 279 aaPredicted RBP13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 PTCH2Q9Y6C5 1203 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 FAM234BA2RU67 622 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 SOAT2O75908 522 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 PABPC1P11940 636 aaKnown RBP13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 CYP4B1P13584 511 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 GGT1P19440 569 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 NKX2-5P52952 324 aaPredicted RBP13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 NCS1P62166 190 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 PPP2R2BQ00005 443 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 SLC13A2Q13183 592 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 PRKG2Q13237 762 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 CCDC81Q6ZN84 652 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 PRR23BQ6ZRT6 265 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 MFSD4AQ8N468 514 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 Q8N9G6 341 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms