RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 UGT1A7Q9HAW7 530 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 UGT1A10Q9HAW8 530 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 UGT1A8Q9HAW9 530 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 VPS45Q9NRW7 570 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 SEPT3Q9UH03 358 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 NME7Q9Y5B8 376 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 PCDHB3Q9Y5E6 796 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 ZNF839A8K0R7 811 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 E5RJQ4 531 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 PTGESO14684 152 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 PDGFBP01127 241 aaPredicted RBP12.47□□□□□ -0.41
DDX55-206ENST00000539934 OPN1MWP04001 364 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 HRGP04196 525 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 C8BP07358 591 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 LINC00271P0C7V0 271 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 OPN1MW2P0DN77 364 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 OPN1MW3P0DN78 364 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 GSTM5P46439 218 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 LRRC38Q5VT99 294 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 OR6B2Q6IFH4 312 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 FUT10Q6P4F1 479 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 MCRS1Q96EZ8 462 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 VPS39Q96JC1 886 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 KCNH6Q9H252 994 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 TM9SF3Q9HD45 589 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 NDE1Q9NXR1 346 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 GGT7Q9UJ14 662 aa12.47□□□□□ -0.41
DDX55-206ENST00000539934 TRMT6Q9UJA5 497 aaKnown RBP12.47□□□□□ -0.41
DDX55-206ENST00000539934 MEIS3P2A8K0S8 358 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 ASNA1O43681 348 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 SCGB1D2O95969 90 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 THEGLP0DJG4 465 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 THRAP10827 490 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 OXTRP30559 389 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 FSCBQ5H9T9 825 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 TOR2AQ5JU69 321 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 CDKL4Q5MAI5 379 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 SAPCD1Q5SSQ6 148 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 SLC9A4Q6AI14 798 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 SRRM1Q8IYB3 904 aaKnown RBP12.46□□□□□ -0.41
DDX55-206ENST00000539934 EID3Q8N140 333 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 ATG4AQ8WYN0 398 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 TESCQ96BS2 214 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 POLR1EQ9GZS1 481 aaKnown RBP12.46□□□□□ -0.41
DDX55-206ENST00000539934 AGO3Q9H9G7 860 aaKnown RBP12.46□□□□□ -0.41
DDX55-206ENST00000539934 SPACA1Q9HBV2 294 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 IFT46Q9NQC8 304 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 EIF3KQ9UBQ5 218 aaKnown RBP12.46□□□□□ -0.41
DDX55-206ENST00000539934 CD207Q9UJ71 328 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 SNX24Q9Y343 169 aa12.46□□□□□ -0.41
DDX55-206ENST00000539934 TCP11X1B4DZS4 312 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 WRBO00258 174 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 DENRO43583 198 aaKnown RBP12.46□□□□□ -0.42
DDX55-206ENST00000539934 HCRTO43612 131 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 ZNF623O75123 536 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 CRTAMO95727 393 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 WDPCPO95876 746 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 RARGP13631 454 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 RAB3AP20336 220 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 MX2P20592 715 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 CD52P31358 61 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 P2RY4P51582 365 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 ATP12AP54707 1039 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 LILRA4P59901 499 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 COPZ1P61923 177 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 FLI1Q01543 452 aaPredicted RBP12.46□□□□□ -0.42
DDX55-206ENST00000539934 DSC1Q08554 894 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 SPARCL1Q14515 664 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 PPP2R5DQ14738 602 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 MFSD13AQ14CX5 517 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 TLR1Q15399 786 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 PAN2Q504Q3 1202 aaKnown RBP12.46□□□□□ -0.42
DDX55-206ENST00000539934 TEX30Q5JUR7 227 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 FAM183BPQ6ZVS7 135 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 VSIG1Q86XK7 387 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 URGCPQ8TCY9 931 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 ZNF398Q8TD17 642 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 KLHL6Q8WZ60 621 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 ATOH1Q92858 354 aaPredicted RBP12.46□□□□□ -0.42
DDX55-206ENST00000539934 CAMK1GQ96NX5 476 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 SLITRK1Q96PX8 696 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 GAD1Q99259 594 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 SUV39H2Q9H5I1 410 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 PRDM9Q9NQV7 894 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 CHST7Q9NS84 486 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 RIC8BQ9NVN3 520 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 NFKBIL1Q9UBC1 381 aaPredicted RBP12.46□□□□□ -0.42
DDX55-206ENST00000539934 PADI3Q9ULW8 664 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 SNX13Q9Y5W8 968 aa12.46□□□□□ -0.42
DDX55-206ENST00000539934 BUD23O43709 281 aaKnown RBP12.45□□□□□ -0.42
DDX55-206ENST00000539934 MAGEC1O60732 1142 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 LRCH4O75427 683 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 THP07101 528 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 FGFR1P11362 822 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 ZNF23P17027 643 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 LMO2P25791 158 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 ADORA2BP29275 332 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 ALDH3B2P48448 385 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 RAB4BP61018 213 aa12.45□□□□□ -0.42
DDX55-206ENST00000539934 GPLD1P80108 840 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms