RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 OR52A4PA6NMU1 304 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 TRIM16O95361 564 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 SLC19A1P41440 591 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 OR1D5P58170 312 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 DMPKQ09013 629 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 MORF4L2Q15014 288 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 BBS9Q3SYG4 887 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 FASTKD1Q53R41 847 aaKnown RBP15.46■□□□□ 0.07
RPAIN-206ENST00000539417 CDCP2Q5VXM1 449 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 TMPRSS9Q7Z410 1059 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 ZNF438Q7Z4V0 828 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 PCGF5Q86SE9 256 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 TMEM135Q86UB9 458 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 SPDYE1Q8NFV5 336 aaPredicted RBP15.46■□□□□ 0.07
RPAIN-206ENST00000539417 OR2L2Q8NH16 312 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 ERP44Q9BS26 406 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 GRHL1Q9NZI5 618 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 ATXN7L1Q9ULK2 861 aaPredicted RBP15.46■□□□□ 0.07
RPAIN-206ENST00000539417 MAD1L1Q9Y6D9 718 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 FREM2Q5SZK8 3169 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 MGAT4DA6NG13 374 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 IQCF5A8MTL0 148 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 PDZK1P1A8MUH7 402 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 NUDT21O43809 227 aaKnown RBP15.46■□□□□ 0.06
RPAIN-206ENST00000539417 UBE2IP63279 158 aaKnown RBP15.46■□□□□ 0.06
RPAIN-206ENST00000539417 SLC7A5Q01650 507 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 ITIH4Q14624 930 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 ZNF789Q5FWF6 425 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.46■□□□□ 0.06
RPAIN-206ENST00000539417 METRNLQ641Q3 311 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 DUPD1Q68J44 220 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 KIAA0930Q6ICG6 404 aaPredicted RBP15.46■□□□□ 0.06
RPAIN-206ENST00000539417 PACS1Q6VY07 963 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 SPRED1Q7Z699 444 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 NOA1Q8NC60 698 aaKnown RBP15.46■□□□□ 0.06
RPAIN-206ENST00000539417 NAT6Q93015 286 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 STAMBPL1Q96FJ0 436 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 LINC00615Q96LM1 132 aaPredicted RBP15.46■□□□□ 0.06
RPAIN-206ENST00000539417 LRRC1Q9BTT6 524 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 SYNDIG1Q9H7V2 258 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 SAMD15Q9P1V8 674 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 ANAPC5Q9UJX4 755 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 DNMT3AQ9Y6K1 912 aaPredicted RBP15.46■□□□□ 0.06
RPAIN-206ENST00000539417 RPS6KL1Q9Y6S9 549 aa15.46■□□□□ 0.06
RPAIN-206ENST00000539417 PIKFYVEQ9Y2I7 2098 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 CFAP99D6REC4 459 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 NTN3O00634 580 aaPredicted RBP15.45■□□□□ 0.06
RPAIN-206ENST00000539417 MT-CO3P00414 261 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 RPLP0P05388 317 aaKnown RBP15.45■□□□□ 0.06
RPAIN-206ENST00000539417 POLBP06746 335 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 RALBP11234 206 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 ITGB6P18564 788 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 IDSP22304 550 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 PDX1P52945 283 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 SHC2P98077 582 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 E2F1Q01094 437 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 CFHR1Q03591 330 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 CKAP4Q07065 602 aaKnown RBP15.45■□□□□ 0.06
RPAIN-206ENST00000539417 TARDBPQ13148 414 aaKnown RBP eCLIP15.45■□□□□ 0.06
RPAIN-206ENST00000539417 FASTKD3Q14CZ7 662 aaKnown RBP15.45■□□□□ 0.06
RPAIN-206ENST00000539417 WHAMMP3Q1A5X7 153 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 NKAIN2Q5VXU1 208 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 DUS1LQ6P1R4 473 aaKnown RBP15.45■□□□□ 0.06
RPAIN-206ENST00000539417 ABRAXAS1Q6UWZ7 409 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 CCNJLQ8IV13 435 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 CFAP206Q8IYR0 622 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 GPR150Q8NGU9 434 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 ZNF514Q96K75 400 aaPredicted RBP15.45■□□□□ 0.06
RPAIN-206ENST00000539417 CCM2Q9BSQ5 444 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 WWP1Q9H0M0 922 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 CPNE7Q9UBL6 633 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 PCDHB1Q9Y5F3 818 aa15.45■□□□□ 0.06
RPAIN-206ENST00000539417 CFAP20Q9Y6A4 193 aaKnown RBP15.45■□□□□ 0.06
RPAIN-206ENST00000539417 FAM221BA6H8Z2 402 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 RHPN2P1A8MT19 583 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 PDHA2P29803 388 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 ALDH4A1P30038 563 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 ELK3P41970 407 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 NSG1P42857 185 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 FASLGP48023 281 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 PREPP48147 710 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 HHEXQ03014 270 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 CAMK2BQ13554 666 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 NR1D2Q14995 579 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 AGAP9Q5VTM2 703 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 CCNI2Q6ZMN8 369 aaPredicted RBP15.44■□□□□ 0.06
RPAIN-206ENST00000539417 CENPUQ71F23 418 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 MAATS1Q7Z4T9 603 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 B3GNT8Q7Z7M8 397 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 ANKMY2Q8IV38 441 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 DENND6AQ8IWF6 608 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 KRT222Q8N1A0 295 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 DCBLD1Q8N8Z6 715 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 HEXDCQ8WVB3 486 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 JPH3Q8WXH2 748 aaPredicted RBP15.44■□□□□ 0.06
RPAIN-206ENST00000539417 RMDN2Q96LZ7 410 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 INSM2Q96T92 566 aaPredicted RBP15.44■□□□□ 0.06
RPAIN-206ENST00000539417 NRTNQ99748 197 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 EBNA1BP2Q99848 306 aaKnown RBP15.44■□□□□ 0.06
RPAIN-206ENST00000539417 TBC1D10AQ9BXI6 508 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms