RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 C1orf52Q8N6N3 182 aaKnown RBP4.42□□□□□ -1.7
CCDC7-209ENST00000539197 SLC38A9Q8NBW4 561 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 MMABQ96EY8 250 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-209ENST00000539197 UBXN10Q96LJ8 280 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 RPS6KC1Q96S38 1066 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 PKP2Q99959 881 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 SYT15Q9BQS2 421 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 PCNX3Q9H6A9 2034 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 SCPEP1Q9HB40 452 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 MBNL1Q9NR56 388 aaKnown RBP4.42□□□□□ -1.7
CCDC7-209ENST00000539197 NAALADL1Q9UQQ1 740 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 RABGAP1Q9Y3P9 1069 aa4.42□□□□□ -1.7
CCDC7-209ENST00000539197 IGHV4-4A0A075B6R2 117 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 PLK4O00444 970 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 PI15O43692 258 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 DUS4LO95620 317 aaKnown RBP4.41□□□□□ -1.7
CCDC7-209ENST00000539197 TRIM49P0CI25 452 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 TRIM49CP0CI26 452 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 ICAM3P32942 547 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 THOP1P52888 689 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 SNX16P57768 344 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 RIGQ13278 110 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 ZNF774Q6NX45 483 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 ERC1Q8IUD2 1116 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 PLD3Q8IV08 490 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 GCSAMQ8N6F7 178 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 SMPDL3BQ92485 455 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 SLC47A1Q96FL8 570 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 EGLN2Q96KS0 407 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 NR1H4Q96RI1 486 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-209ENST00000539197 TMEM39BQ9GZU3 492 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 TP53TG3Q9ULZ0 132 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 CSAG2Q9Y5P2 127 aa4.41□□□□□ -1.7
CCDC7-209ENST00000539197 ZNF197O14709 1029 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 TGFB1I1O43294 461 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 AP2A2O94973 939 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 RAF1P04049 648 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 EDN1P05305 212 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 CBLP22681 906 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 CEACAM8P31997 349 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-209ENST00000539197 TRPC3Q13507 836 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 FRG1Q14331 258 aaKnown RBP4.4□□□□□ -1.71
CCDC7-209ENST00000539197 CTU2Q2VPK5 515 aaKnown RBP4.4□□□□□ -1.71
CCDC7-209ENST00000539197 LRIF1Q5T3J3 769 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 CDC20BQ86Y33 519 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 LAT2Q9GZY6 243 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 SEMA6AQ9H2E6 1030 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 PPCSQ9HAB8 311 aa4.4□□□□□ -1.71
CCDC7-209ENST00000539197 ADAMTS9Q9P2N4 1935 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 H3BQ06 376 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-209ENST00000539197 HRH2P25021 359 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 CCR10P46092 362 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 HARS2P49590 506 aaKnown RBP4.39□□□□□ -1.71
CCDC7-209ENST00000539197 KRTAP10-8P60410 259 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 CEBPZQ03701 1054 aaKnown RBP4.39□□□□□ -1.71
CCDC7-209ENST00000539197 MFAP5Q13361 173 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 CDC73Q6P1J9 531 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 CYP26C1Q6V0L0 522 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 CRYBG2Q8N1P7 616 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 HTRA1Q92743 480 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 ZNF414Q96IQ9 312 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 PIP5K1AQ99755 562 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 PRR34Q9NV39 138 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 DLGAP2Q9P1A6 1054 aa4.39□□□□□ -1.71
CCDC7-209ENST00000539197 A0A1W2PRG0 241 aa4.38□□□□□ -1.71
CCDC7-209ENST00000539197 ZBED6P86452 979 aa4.38□□□□□ -1.71
CCDC7-209ENST00000539197 LMNTD2Q8IXW0 634 aa4.38□□□□□ -1.71
CCDC7-209ENST00000539197 NGEFQ8N5V2 710 aa4.38□□□□□ -1.71
CCDC7-209ENST00000539197 NFKBIDQ8NI38 313 aa4.38□□□□□ -1.71
CCDC7-209ENST00000539197 GFI1Q99684 422 aa4.38□□□□□ -1.71
CCDC7-209ENST00000539197 HERPUD2Q9BSE4 406 aa4.38□□□□□ -1.71
CCDC7-209ENST00000539197 RANGRFQ9HD47 186 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-209ENST00000539197 MTMR10Q9NXD2 777 aa4.38□□□□□ -1.71
CCDC7-209ENST00000539197 CWC15Q9P013 229 aaKnown RBP4.38□□□□□ -1.71
CCDC7-209ENST00000539197 TMEM184BQ9Y519 407 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-209ENST00000539197 CYP46A1Q9Y6A2 500 aa4.38□□□□□ -1.71
CCDC7-209ENST00000539197 COMMD10Q9Y6G5 202 aa4.38□□□□□ -1.71
CCDC7-209ENST00000539197 OR2M5A3KFT3 312 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 OR6C76A6NM76 312 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 SELLP14151 372 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 CKMT2P17540 419 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 EPHA8P29322 1005 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-209ENST00000539197 MRPS34P82930 218 aaKnown RBP4.37□□□□□ -1.71
CCDC7-209ENST00000539197 BIRC2Q13490 618 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 RRS1Q15050 365 aaKnown RBP4.37□□□□□ -1.71
CCDC7-209ENST00000539197 SLC16A9Q7RTY1 509 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 ZNF383Q8NA42 475 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 OLIG1Q8TAK6 271 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 GCC1Q96CN9 775 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 FOXN4Q96NZ1 517 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 PIGQQ9BRB3 760 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 KLK13Q9UKR3 277 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 KDM3AQ9Y4C1 1321 aa4.37□□□□□ -1.71
CCDC7-209ENST00000539197 IGHV4-61A0A0C4DH41 118 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 PAGE4O60829 102 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 ZNF217O75362 1048 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 IGHV4-59P01825 116 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 DNAH10OSP0CZ25 163 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 CDH11P55287 796 aa4.36□□□□□ -1.71
CCDC7-209ENST00000539197 PRKAA1Q13131 559 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms