RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 OCIAD1Q9NX40 245 aa12.37□□□□□ -0.43
CLSTN3-208ENST00000538933 MTRF1LQ9UGC7 380 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-208ENST00000538933 DMGDHQ9UI17 866 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-208ENST00000538933 NEU2Q9Y3R4 380 aa12.37□□□□□ -0.43
CLSTN3-208ENST00000538933 OR1A2Q9Y585 309 aa12.37□□□□□ -0.43
CLSTN3-208ENST00000538933 B4E171 279 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 SEC31AO94979 1220 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TNFP01375 233 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 PDGFAP04085 211 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 UGT2B4P06133 528 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TIMP2P16035 220 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TPSB2P20231 275 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TSPAN7P41732 249 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 EPHB1P54762 984 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 PLTPP55058 493 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 NIPAL4Q0D2K0 466 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 SQSTM1Q13501 440 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TRA2AQ13595 282 aaKnown RBP eCLIP12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 CUL1Q13616 776 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 MORF4L2Q15014 288 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 LRRC14Q15048 493 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TPSAB1Q15661 275 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 AMZ1Q400G9 498 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 C1QL3Q5VWW1 255 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 ALG1LQ6GMV1 187 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 KDELC2Q7Z4H8 507 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TAF8Q7Z7C8 310 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 LINC00523Q86TU6 105 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TTC7BQ86TV6 843 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 HOOK3Q86VS8 718 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 NDUFAF2Q8N183 169 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 DNAAF3Q8N9W5 541 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 AGBL5Q8NDL9 886 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 CCL4L1Q8NHW4 92 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 OR1E3Q8WZA6 343 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 WDR92Q96MX6 357 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 KLHL32Q96NJ5 620 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TUBGCP5Q96RT8 1024 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TBL1YQ9BQ87 522 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 WRAP53Q9BUR4 548 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 FICDQ9BVA6 458 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 C1QTNF7Q9BXJ2 289 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 EIF2B3Q9NR50 452 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 SLC39A1Q9NY26 324 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 KLQ9UEF7 1012 aa12.36□□□□□ -0.43
CLSTN3-208ENST00000538933 TMEM202A6NGA9 273 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 EFCAB7A8K855 629 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 B4DGG1 531 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 GOLGA8MH3BSY2 632 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 AP2A1O95782 977 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 TUBBP07437 444 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 XPAP23025 273 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 NFKBIAP25963 317 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 MAP4P27816 1152 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 HTR1BP28222 390 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 DRG2P55039 364 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 WNT3AP56704 352 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 CDK16Q00536 496 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 SEPT6Q14141 434 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 SPARCL1Q14515 664 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 KCNJ11Q14654 390 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 AGERQ15109 404 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 TMEM52BQ4KMG9 183 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 ARMC12Q5T9G4 340 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 RNASEH2BQ5TBB1 312 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 ANKS6Q68DC2 871 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 CEP128Q6ZU80 1094 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 ASB18Q6ZVZ8 466 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 SRRM1Q8IYB3 904 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 NLGN4XQ8N0W4 816 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 MYRIPQ8NFW9 859 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 NLGN4YQ8NFZ3 816 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 ARRDC2Q8TBH0 407 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 CPT1BQ92523 772 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 OXNAD1Q96HP4 312 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 MLPHQ9BV36 600 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 OSBPL1AQ9BXW6 950 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 FAM129AQ9BZQ8 928 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 TMEM168Q9H0V1 697 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 FGF22Q9HCT0 170 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 SPATS2LQ9NUQ6 558 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 SHOC2Q9UQ13 582 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 COQ6Q9Y2Z9 468 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 MAP4K5Q9Y4K4 846 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 PCDHGC4Q9Y5F7 938 aa12.35□□□□□ -0.43
CLSTN3-208ENST00000538933 AP3B1O00203 1094 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 SOCS5O75159 536 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 PIGNO95427 931 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 THRAP10827 490 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 F8A1P23610 371 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 ALDH4A1P30038 563 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 MAZP56270 477 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 CDK18Q07002 472 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 ABHD18Q0P651 414 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 SLC14A2Q15849 920 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 DCAF12Q5T6F0 453 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 HIBCHQ6NVY1 386 aaPredicted RBP12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 GDPD4Q6W3E5 623 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 CCDC25Q86WR0 208 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 CAMK1DQ8IU85 385 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms