RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 ATAD1Q8NBU5 361 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 SLAIN1Q8ND83 568 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 OR52H1Q8NGJ2 320 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 TSPEARQ8WU66 669 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 NXPE3Q969Y0 559 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 SGTBQ96EQ0 304 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 NSMCE2Q96MF7 247 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 ZSWIM3Q96MP5 696 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 GPR137Q96N19 417 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 CYP2S1Q96SQ9 504 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 PELOQ9BRX2 385 aaKnown RBP12.3□□□□□ -0.44
USP3-203ENST00000538686 AMBRA1Q9C0C7 1298 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 DHX35Q9H5Z1 703 aaKnown RBP12.3□□□□□ -0.44
USP3-203ENST00000538686 RNF121Q9H920 327 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 CD93Q9NPY3 652 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 GGA3Q9NZ52 723 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 RAB23Q9ULC3 237 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 MKL2Q9ULH7 1088 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 U3KQ87 197 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 A0A075B6Q4 140 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 FAM92AA1XBS5 289 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 TUBAL3A6NHL2 446 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 USP17L10C9JJH3 530 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 PRMT5O14744 637 aaPredicted RBP12.3□□□□□ -0.44
USP3-203ENST00000538686 APOL1O14791 398 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 DSCR3O14972 297 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 PRPSAP2O60256 369 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 RFPL3O75679 317 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 PSMD10O75832 226 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 PGLSO95336 258 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 TRUB2O95900 331 aaKnown RBP12.3□□□□□ -0.44
USP3-203ENST00000538686 ECDO95905 644 aaPredicted RBP12.3□□□□□ -0.44
USP3-203ENST00000538686 F9P00740 461 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 APOC1P02654 83 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 CYP11A1P05108 521 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 PROS1P07225 676 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 HTR1EP28566 365 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 CD6P30203 668 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 GSK3BP49841 420 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 DGKQP52824 942 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 FAM209BQ5JX69 171 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 RAP1GAP2Q684P5 730 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 FSTL4Q6MZW2 842 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 OR8H3Q8N146 312 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 WDR48Q8TAF3 677 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 C18orf25Q96B23 403 aaPredicted RBP12.3□□□□□ -0.44
USP3-203ENST00000538686 TUBGCP3Q96CW5 907 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 LRRC58Q96CX6 371 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 TRNT1Q96Q11 434 aaKnown RBP12.3□□□□□ -0.44
USP3-203ENST00000538686 PITHD1Q9GZP4 211 aaPredicted RBP12.3□□□□□ -0.44
USP3-203ENST00000538686 TMEM245Q9H330 911 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 ASAH2Q9NR71 780 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 INTS7Q9NVH2 962 aaKnown RBP12.3□□□□□ -0.44
USP3-203ENST00000538686 GTSE1Q9NYZ3 720 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 SLC17A6Q9P2U8 582 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 MAGEL2Q9UJ55 1249 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 ERVW-1Q9UQF0 538 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 RNF6Q9Y252 685 aa12.3□□□□□ -0.44
USP3-203ENST00000538686 CNTNAP4Q9C0A0 1308 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 AKR7A2O43488 359 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 AHSGP02765 367 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 SERPINF2P08697 491 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 RRASP10301 218 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 HIBADHP31937 336 aaKnown RBP12.29□□□□□ -0.44
USP3-203ENST00000538686 ARPP19P56211 112 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 ELOAQ14241 798 aaKnown RBP12.29□□□□□ -0.44
USP3-203ENST00000538686 QPRTQ15274 297 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 LAMTOR1Q6IAA8 161 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 SULT1C3Q6IMI6 304 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 STRA8Q7Z7C7 330 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 ARFGAP1Q8N6T3 406 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 CDC26Q8NHZ8 85 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 ASB15Q8WXK1 588 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 RNF157Q96PX1 679 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 RC3H2Q9HBD1 1191 aaKnown RBP12.29□□□□□ -0.44
USP3-203ENST00000538686 C14orf119Q9NWQ9 140 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 COL20A1Q9P218 1284 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 MAP10Q9P2G4 905 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 DNAJB9Q9UBS3 223 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 USP18Q9UMW8 372 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 MRPS7Q9Y2R9 242 aaKnown RBP12.29□□□□□ -0.44
USP3-203ENST00000538686 TNPO3Q9Y5L0 923 aaKnown RBP12.29□□□□□ -0.44
USP3-203ENST00000538686 ACTL7AQ9Y615 435 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 ARID2Q68CP9 1835 aa12.29□□□□□ -0.44
USP3-203ENST00000538686 A0A0J9YYE9 177 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 F8W036 122 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 BCKDKO14874 412 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 PAPSS2O95340 614 aaPredicted RBP12.28□□□□□ -0.44
USP3-203ENST00000538686 LDOC1O95751 146 aaPredicted RBP12.28□□□□□ -0.44
USP3-203ENST00000538686 FADS2O95864 444 aaKnown RBP12.28□□□□□ -0.44
USP3-203ENST00000538686 IFNA7P01567 189 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 MT-ND2P03891 347 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 HOXB6P17509 224 aaKnown RBP12.28□□□□□ -0.44
USP3-203ENST00000538686 PIGAP37287 484 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 CCR10P46092 362 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 MASP1P48740 699 aa12.28□□□□□ -0.44
USP3-203ENST00000538686 APLP1P51693 650 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms